PacificBiosciences / DevNetLinks
The DevNet project on github stores the PacBio DevNet website.
☆116Updated 7 years ago
Alternatives and similar repositories for DevNet
Users that are interested in DevNet are comparing it to the libraries listed below
Sorting:
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆118Updated 5 years ago
- SV detection from paired end reads mapping☆117Updated 6 years ago
- NEAT read simulation tools☆101Updated 3 years ago
- Whole Genome Simulator for Next-Generation Sequencing☆101Updated 2 weeks ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆103Updated 5 years ago
- Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data☆114Updated 4 years ago
- Automatically exported from code.google.com/p/ea-utils☆96Updated 2 years ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- ABRA2☆95Updated 3 years ago
- Tool for stripping adaptors and/or merging paired reads with overlap into single reads.☆145Updated 9 years ago
- Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads☆108Updated 2 years ago
- ☆123Updated 4 months ago
- BAM Statistics, Feature Counting and Annotation☆151Updated last week
- A tool for profiling long STRs from short reads☆103Updated 4 years ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆83Updated 3 years ago
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆82Updated 3 years ago
- SV caller for nanopore data☆92Updated 5 years ago
- A fast Python and command-line utility for extracting simple statistics against genome positions based on sequence alignments from a SAM …☆194Updated last week
- WisecondorX — An evolved WISECONDOR☆108Updated last week
- ☆142Updated 2 weeks ago
- MECAT: an ultra-fast mapping, error correction and de novo assembly tool for single-molecule sequencing reads☆111Updated 5 years ago
- Graph realignment tools for structural variants☆164Updated 3 years ago
- Assemblytics is a bioinformatics tool to detect and analyze structural variants from a genome assembly by comparing it to a reference gen…☆145Updated 4 months ago
- A suite of tools for detecting expansions of short tandem repeats☆83Updated 2 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 7 months ago
- Flip-flop basecaller for Oxford Nanopore reads☆99Updated 3 years ago
- pbsv - PacBio structural variant (SV) calling and analysis tools☆159Updated 9 months ago
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 3 years ago
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆99Updated last year
- Variant calling and somatic mutation/CNV detection for next-generation sequencing data☆165Updated 2 years ago