☆33Apr 25, 2022Updated 4 years ago
Alternatives and similar repositories for SADDLE
Users that are interested in SADDLE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design☆73May 26, 2025Updated last year
- An R Package for Multiplex PCR Primer Design and Analysis☆31Jul 12, 2025Updated last year
- Multiplex Primer Design☆21Oct 30, 2020Updated 6 years ago
- Retrieve sequences flanked by an arbitrary number of primers from a nucleotide collection.☆11Jun 11, 2021Updated 5 years ago
- Reference-agnostic Representation and Visualization of Pan-genomes☆19Sep 16, 2021Updated 5 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Highly sensitive pathogen detection☆12Oct 5, 2020Updated 6 years ago
- Automatically design multiplex PCR primer pairs for diverse templates☆37May 23, 2024Updated 2 years ago
- A program for degenerate primer design for broad taxonomic-range PCR for microbial ecology studies☆32Jun 9, 2023Updated 3 years ago
- Package to design primers for MutaSeq and related methods☆11Jan 15, 2021Updated 5 years ago
- This repository houses the code to run SURPI+, a rapid computational pipeline for comprehensive identification of pathogens from clinical…☆45Nov 20, 2019Updated 6 years ago
- GPrimer: a fast GPU-based pipeline for primerdesign for qPCR experiments☆11May 28, 2025Updated last year
- ☆17May 1, 2025Updated last year
- Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens☆42Apr 6, 2026Updated 6 months ago
- a tool for designing primer panels for multiplex PCR.☆113Feb 5, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Clin-mNGS: Automated pipeline for pathogen detection from clinical metagenomic data☆19Jun 29, 2021Updated 5 years ago
- ☆18Jul 27, 2023Updated 3 years ago
- MethyScan: A tool for methylation specific PCR primer design and evaluation☆16Aug 20, 2021Updated 5 years ago
- Papillomavirus genome annotation tool☆10May 2, 2023Updated 3 years ago
- ☆14Mar 11, 2019Updated 7 years ago
- Multiplex PCR design, in silico☆25Mar 4, 2025Updated last year
- WisecondorX — An evolved WISECONDOR☆118Oct 20, 2026Updated last week
- Fragmentase Artifact Detection and Elimination☆13Mar 22, 2022Updated 4 years ago
- ☆25Aug 1, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Multiplex Primer Design☆13May 3, 2020Updated 6 years ago
- Benchmarking different ways of doing read (taxonomic) classification, with a focus on removal of contamination and MTB classification☆14Apr 8, 2024Updated 2 years ago
- PCR Primer Quality Control☆77Oct 15, 2026Updated 2 weeks ago
- A Java package for non-invasive cancer diagnosis using methylation profiles of cell-Free DNA.☆17Apr 2, 2019Updated 7 years ago
- CNV analysis workflow code for the manuscript☆13Jun 22, 2020Updated 6 years ago
- A toolkit to design standard primers, multiplexed primers, and primers around SV's☆13Oct 29, 2022Updated 4 years ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆18May 26, 2025Updated last year
- This repository contains scripts used in the manuscript "Massive expansion of human gut bacteriophage diversity"☆20Feb 3, 2021Updated 5 years ago
- Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).☆310Aug 2, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Apr 13, 2021Updated 5 years ago
- ☆15Jul 7, 2024Updated 2 years ago
- ☆23Aug 28, 2026Updated 2 months ago
- Derive shell commands from Mongoid sessions and configuration options.☆14Oct 18, 2026Updated last week
- ☆11Jun 14, 2023Updated 3 years ago
- A workflow for methylation analysis using long-read (ONT) sequencing data.☆11Apr 28, 2026Updated 6 months ago
- Variant sequence context analysis tool☆10Jul 5, 2024Updated 2 years ago