NinaGXie / SADDLELinks
☆33Updated 3 years ago
Alternatives and similar repositories for SADDLE
Users that are interested in SADDLE are comparing it to the libraries listed below
Sorting:
- This repository houses the code to run SURPI+, a rapid computational pipeline for comprehensive identification of pathogens from clinical…☆41Updated 5 years ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design☆59Updated last month
- Helper scripts for biological data processing from Sentieon☆64Updated 8 months ago
- PCR Primer Quality Control☆63Updated 2 weeks ago
- Some bioinformic domestic scripts.☆35Updated 2 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated 2 months ago
- ☆71Updated 5 years ago
- PrimerServer2: a high-throughput primer design and specificity-checking platform☆78Updated 2 years ago
- Workflow for Building Microsynteny Networks☆55Updated 2 years ago
- NANOME pipeline (Nanopore long-read sequencing consensus DNA methylation detection method and pipeline)☆31Updated 2 weeks ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆112Updated last year
- Snakemake workflow for metagenomic classification with Kraken2☆65Updated 2 years ago
- DNA 5mC methylation detection from Dorado or Guppy basecalled Oxford Nanopore reads☆50Updated 4 months ago
- NLR annotation tool☆31Updated last year
- A package for designing compact and comprehensive capture probe sets.☆87Updated last year
- Error correction of ONT transcript reads☆58Updated last year
- TransposonUltimate - a holistic set of tools for transposon identification☆84Updated 3 years ago
- PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics☆35Updated 2 years ago
- Simple code snippets and data for the One Flowcell - One Assembly study☆35Updated 7 years ago
- ☆74Updated 5 years ago
- a tool for inferring species tree from sequencing reads☆150Updated 5 months ago
- Development version of Easyfig☆98Updated last year
- nanodisco: a toolbox for discovering and exploiting multiple types of DNA methylation from individual bacteria and microbiomes using nano…☆70Updated 3 years ago
- Genomic related tools☆71Updated 3 years ago
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆31Updated last year
- A python program to call methylation (m6A in DNA) from nanopore signal data☆47Updated 4 years ago
- Variant calling tool for long-read sequencing data☆111Updated 3 months ago
- a tool for designing primer panels for multiplex PCR.☆103Updated last year