CenterForMedicalGeneticsGhent / WisecondorXLinks
WisecondorX — An evolved WISECONDOR
☆97Updated 8 months ago
Alternatives and similar repositories for WisecondorX
Users that are interested in WisecondorX are comparing it to the libraries listed below
Sorting:
- Script to automatically create and run IGV snapshot batchscripts☆141Updated 2 years ago
- Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics☆111Updated last month
- Relevant papers for CNV and SV approaches☆94Updated 7 months ago
- This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and In…☆53Updated 4 years ago
- FEELnc : FlExible Extraction of LncRNA☆87Updated 8 months ago
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆79Updated 2 years ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆69Updated 9 months ago
- A tool for profiling long STRs from short reads☆97Updated 4 years ago
- BAM Statistics, Feature Counting and Annotation☆150Updated 3 months ago
- phasing and Allele Specific Expression from RNA-seq☆115Updated 10 months ago
- Reference data: BED files, genes, transcripts, variations.☆83Updated 7 years ago
- Segmented HAPlotype Estimation and Imputation Tool☆80Updated 9 months ago
- Microsatellite instability (MSI) detection for tumor only data.☆106Updated last year
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 2 years ago
- ABRA2☆92Updated 2 years ago
- a lightweight bam file depth statistical tool☆150Updated 8 months ago
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆161Updated 9 months ago
- Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer☆97Updated 4 years ago
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 6 years ago
- A structural variation pipeline for short-read sequencing☆188Updated this week
- Software program for checking sample matching for NGS data☆132Updated 11 months ago
- VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.☆97Updated last year
- Allele-specific alignment sorting☆56Updated 2 years ago
- MONOD2 is a toolkit for methylation haplotype analysis of bisulfite sequencing data☆39Updated 6 years ago
- pbsv - PacBio structural variant (SV) calling and analysis tools☆149Updated 3 months ago
- QDNAseq package for Bioconductor☆50Updated 10 months ago
- Variant calling and somatic mutation/CNV detection for next-generation sequencing data☆159Updated 2 years ago
- toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR☆62Updated last year
- Correct mismatches, microindels, and noncanonical splice junctions in long reads that have been mapped to the genome☆69Updated last year
- Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data☆85Updated 4 months ago