CNV analysis workflow code for the manuscript
☆13Jun 22, 2020Updated 5 years ago
Alternatives and similar repositories for CNVWorkflow_Code
Users that are interested in CNVWorkflow_Code are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆20Jan 17, 2020Updated 6 years ago
- Comprehensive genome-wide visualization of absolute copy number and copy neutral variations☆29Apr 10, 2019Updated 7 years ago
- RNA editing tests☆17Sep 24, 2020Updated 5 years ago
- ☆11Jul 13, 2018Updated 7 years ago
- Copy number calling and variant classification using targeted short read sequencing☆146Feb 19, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Enabling differential allele-specific analysis☆11Dec 28, 2024Updated last year
- Multi-origin batch effect remover method☆19Jan 31, 2023Updated 3 years ago
- Quantifying copy number signatures from absolute copy number profiles☆27Jul 23, 2025Updated 9 months ago
- Characterization of Germline variants☆101Mar 15, 2022Updated 4 years ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Aug 17, 2021Updated 4 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆15May 12, 2025Updated 11 months ago
- Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.☆159Feb 12, 2026Updated 2 months ago
- Decrypting somatic mutation patterns to reveal the evolution of cancer☆57Mar 10, 2021Updated 5 years ago
- Method to detect exonic CNVs in NGS Gene Targeted Panels☆16Dec 3, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The curatedOvarianData package provides data for gene expression analysis in patients with ovarian cancer☆12Apr 10, 2026Updated 2 weeks ago
- A literature review for constructing and using knowledge graphs in a biomedical setting.☆11May 22, 2020Updated 5 years ago
- ☆15Sep 20, 2022Updated 3 years ago
- Mutation detection using GATK4 best practices and latest RNA editing filters resources. Works with both Hg38 and Hg19☆78Jan 13, 2026Updated 3 months ago
- ☆11Nov 22, 2024Updated last year
- Identify and correct invalid gene symbols☆62Nov 16, 2024Updated last year
- An R package to query EBI's Ontology Lookup Service (OLS)☆11Dec 10, 2025Updated 4 months ago
- Absolute Copy Number Estimation using low-coverage whole genome sequencing data☆20Oct 17, 2025Updated 6 months ago
- COGS Operates Google Sheets☆16Nov 20, 2025Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Code used to generate the results in "Somatic chronology of treatment-resistant prostate cancer via deep whole-genome ctDNA sequencing"☆16Mar 11, 2024Updated 2 years ago
- CNV detection tool for targeted NGS panel data☆16Feb 28, 2022Updated 4 years ago
- A community menagarie of automated variant validations using bcbio and the Common Workflow Language☆21Nov 3, 2021Updated 4 years ago
- 📚书：R语言实战机器学习☆58Nov 3, 2024Updated last year
- ☆25Feb 20, 2025Updated last year
- Optimizing Cancer Mutation Signatures Jointly with Sampling Likelihood☆10Aug 22, 2022Updated 3 years ago
- ☆43Feb 9, 2024Updated 2 years ago
- Model files for Sentieon variant callers☆16Apr 6, 2026Updated 3 weeks ago
- ☆16Sep 21, 2021Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆18Aug 22, 2021Updated 4 years ago
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Feb 12, 2022Updated 4 years ago
- Accessing AlphaMissense Data Resources in R☆13Nov 26, 2025Updated 5 months ago
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆10Jan 21, 2022Updated 4 years ago
- Interpretation of RNAseq experiments through robust, efficient comparison to public databases☆16Oct 31, 2025Updated 5 months ago
- PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using …☆30Mar 20, 2026Updated last month
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago