aresti / primalschemeLinks
a tool for designing primer panels for multiplex PCR.
☆106Updated last year
Alternatives and similar repositories for primalscheme
Users that are interested in primalscheme are comparing it to the libraries listed below
Sorting:
- A package for designing compact and comprehensive capture probe sets.☆92Updated last year
- Development version of Easyfig☆102Updated 2 years ago
- Snakemake workflow for metagenomic classification with Kraken2☆66Updated 2 years ago
- ☆81Updated 5 years ago
- The ARTIC fieldbioinformatics pipeline☆127Updated this week
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 7 months ago
- iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing.☆131Updated this week
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- Antibiotic resistance prediction in minutes☆112Updated last year
- a tool for inferring species tree from sequencing reads☆156Updated 3 weeks ago
- Long-read mock community experiments☆104Updated 4 years ago
- NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design☆67Updated 7 months ago
- A fast whole-genome aligner based on de Bruijn graphs☆156Updated 6 months ago
- qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.☆80Updated 5 years ago
- Python programs for processing GFF3 files☆102Updated 3 weeks ago
- Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data☆120Updated 2 years ago
- snipit: summarise snps relative to your reference sequence☆164Updated 3 months ago
- Processing pipeline for pan-genome visulization and exploration☆142Updated 2 years ago
- Visualise and analyse nanopore (ONT) raw signals☆126Updated 3 weeks ago
- Analysis components from Oxford Nanopore Research☆96Updated last year
- A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), wit…☆91Updated 2 years ago
- Read Until client library for Nanopore Sequencing☆107Updated last year
- ONT assembly and Illumina polishing pipeline☆89Updated 5 years ago
- Parsnp was designed to align the core genome of hundreds to thousands of bacterial genomes within a few minutes to few hours. Input can b…☆148Updated 3 months ago
- MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumin…☆46Updated 4 months ago
- Research release basecalling models and configurations☆117Updated 7 months ago
- Metagenomic classification of long-read sequencing data☆97Updated last month
- A post sequencing QC tool for Oxford Nanopore sequencers☆105Updated 3 weeks ago
- DDBJ Fast Annotation and Submission Tool☆83Updated 3 months ago
- List of genome assembly tools☆89Updated last week