Associated code for EvoWeaver publication
☆17May 19, 2025Updated last year
Alternatives and similar repositories for EvoWeaver-ExampleCode
Users that are interested in EvoWeaver-ExampleCode are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆23Aug 8, 2024Updated 2 years ago
- Evolutionary Sparse Learning - Paired Species Contrast☆17Jul 22, 2026Updated last month
- Tool for fully-automated inference of species trees from raw genome assemblies☆50Updated this week
- Benchmarking scripts for Gaia☆17Apr 10, 2025Updated last year
- Clade age estimation using a Bayesian Brownian bridge model☆15Sep 3, 2025Updated 11 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Genotyping of paralog specific gene types☆22Updated this week
- Sorting and subsampling phylogenomic datasets☆35Apr 9, 2025Updated last year
- ☆16Jan 10, 2023Updated 3 years ago
- SplitsTree App☆132Updated this week
- a flexible tool for microsatellite investigation and visualization☆10Jun 15, 2026Updated 2 months ago
- ML phylogenetic inference for non-model organisms with short reads & assemblies☆15Jun 30, 2026Updated 2 months ago
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated 2 years ago
- Scripts and instructions to apply RiboTIE on Ribo-seq data☆20Jul 22, 2025Updated last year
- TQSLE v1.0 released☆10Aug 29, 2023Updated 3 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- FUGAsseM: Function predictor of Uncharacterized Gene products by Assessing high-dimensional community data in Microbiomes☆21Dec 26, 2025Updated 8 months ago
- Methylatino phasing using PacBio CCS reads☆14Dec 13, 2024Updated last year
- A Full Featured Multiple Sequence Alignment Editor.☆28May 21, 2018Updated 8 years ago
- ☆13Jul 8, 2026Updated last month
- ☆11Mar 14, 2026Updated 5 months ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- Microbial Phenotype Prediction, successor to PICA, implemented with Python 3.7 and scikit-learn☆13Sep 10, 2021Updated 4 years ago
- phyloGAN is a Generative Adversarial Network (GAN) that infers phylognetic relationships.☆11Jul 8, 2024Updated 2 years ago
- backup of old blog at sciencemeetproductivity.tumblr.com☆18Aug 10, 2014Updated 12 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆23Jun 24, 2022Updated 4 years ago
- Database and pipeline for protein structure-guided annotations of ecologically relevant functions at the metagenome scale.☆34Nov 2, 2025Updated 9 months ago
- R package for binmap☆12Aug 3, 2023Updated 3 years ago
- ☆34Jun 20, 2025Updated last year
- ☆18Aug 1, 2023Updated 3 years ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Aug 11, 2026Updated 2 weeks ago
- dada2 formatted nifH database☆13May 17, 2024Updated 2 years ago
- Gene tree - species tree reconciliation from gene tree distributions☆43Apr 30, 2026Updated 4 months ago
- Tools for F1 hybrid PSMC (hPSMC) divergence time inference from whole genomes☆15May 29, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Examples for gget (https://github.com/pachterlab/gget).☆41Feb 20, 2026Updated 6 months ago
- A Snakemake pipeline for cellranger to process 10x single-cell RNAseq data☆16Oct 15, 2019Updated 6 years ago
- ☆12Feb 16, 2025Updated last year
- Trim, Align to genome, Deduplicate, Realign WGS sequencing samples☆18Feb 23, 2026Updated 6 months ago
- ☆13Jul 23, 2026Updated last month
- Plot allele frequencies in VCF files☆11Apr 13, 2026Updated 4 months ago
- ☆14May 22, 2025Updated last year