Associated code for EvoWeaver publication
☆17May 19, 2025Updated 10 months ago
Alternatives and similar repositories for EvoWeaver-ExampleCode
Users that are interested in EvoWeaver-ExampleCode are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tool for fully-automated inference of species trees from raw genome assemblies☆44Mar 24, 2026Updated 2 weeks ago
- ☆21Aug 8, 2024Updated last year
- Sorting and subsampling phylogenomic datasets☆32Apr 9, 2025Updated last year
- Database and pipeline for protein structure-guided annotations of ecologically relevant functions at the metagenome scale.☆24Nov 2, 2025Updated 5 months ago
- Clade age estimation using a Bayesian Brownian bridge model☆15Sep 3, 2025Updated 7 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- SplitsTree App☆124Apr 1, 2026Updated last week
- ☆16Jan 10, 2023Updated 3 years ago
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated 2 years ago
- TQSLE v1.0 released☆10Aug 29, 2023Updated 2 years ago
- Scripts and instructions to apply RiboTIE on Ribo-seq data☆19Jul 22, 2025Updated 8 months ago
- This tutorial is a guide to perform TWAS with the data used in Torres‐Rodríguez, J. Vladimir, et al. "Population‐level gene expression ca…☆23Feb 23, 2026Updated last month
- Gene tree - species tree reconciliation from gene tree distributions☆38Mar 13, 2026Updated 3 weeks ago
- Methylatino phasing using PacBio CCS reads☆14Dec 13, 2024Updated last year
- ☆12Sep 14, 2025Updated 6 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆11Mar 14, 2026Updated 3 weeks ago
- blastn2dotplots: multiple dot-plot visualizer☆24Sep 15, 2025Updated 6 months ago
- A Full Featured Multiple Sequence Alignment Editor.☆26May 21, 2018Updated 7 years ago
- Microbial Phenotype Prediction, successor to PICA, implemented with Python 3.7 and scikit-learn☆12Sep 10, 2021Updated 4 years ago
- phyloGAN is a Generative Adversarial Network (GAN) that infers phylognetic relationships.☆11Jul 8, 2024Updated last year
- ☆17Aug 1, 2023Updated 2 years ago
- EnzyDock: Protein–Ligand Docking of Multiple Reactive States along a Reaction Coordinate in Enzymes☆18Sep 5, 2024Updated last year
- Visualing species tree from ASTRAL with gene tree discordance☆29May 13, 2025Updated 10 months ago
- R package for binmap☆12Aug 3, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- IQ-TREE version 3: software for phylogenetics☆122Apr 2, 2026Updated last week
- ☆18Dec 8, 2021Updated 4 years ago
- Tools for F1 hybrid PSMC (hPSMC) divergence time inference from whole genomes☆14May 29, 2024Updated last year
- ☆32Mar 2, 2026Updated last month
- ☆32Jun 20, 2025Updated 9 months ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Jul 8, 2025Updated 9 months ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- Examples for gget (https://github.com/pachterlab/gget).☆39Feb 20, 2026Updated last month
- dada2 formatted nifH database☆13May 17, 2024Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- An Example of Subgenome Phasing for Complex Allopolyploidy☆15Nov 6, 2025Updated 5 months ago
- A Snakemake pipeline for cellranger to process 10x single-cell RNAseq data☆16Oct 15, 2019Updated 6 years ago
- ☆23Feb 26, 2026Updated last month
- A collection of easy-to-use custom ggplot2-based functions for data exploration and analysis. Each function handles data preprocessing an…☆24Dec 23, 2025Updated 3 months ago
- A python script for PyMol to make protein-ligand interaction images.☆18Apr 1, 2025Updated last year
- ☆34Apr 25, 2022Updated 3 years ago
- ☆13Aug 15, 2025Updated 7 months ago