Alternatives and similar repositories for IgDiscover-legacy:

Users that are interested in IgDiscover-legacy are comparing it to the libraries listed below

• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆26Updated last year
• TRON-Bioinformatics / splice2neo
  R package to analyze aberrant splicing junctions in tumor samples to identify neoepitopes
  ☆13Updated 2 months ago
• djhn75 / RNAEditor
  ☆14Updated 2 years ago
• McGranahanLab / mhc-hammer
  Pipeline to detect HLA disruption from WES and RNAseq data
  ☆16Updated last week
• julianeweller / MinsePIE
  Modelling insertion efficiency for Prime Insertion Experiments
  ☆13Updated 9 months ago
• briney / abtools
  Analysis of antibody NGS data
  ☆12Updated 2 years ago
• matsengrp / phip-flow
  A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets
  ☆11Updated 2 months ago
• matsengrp / phippery
  ☆14Updated 2 months ago
• jfjlaros / demultiplex
  Versatile FASTA/FASTQ demultiplexer.
  ☆32Updated 7 months ago
• goodarzilab / SwitchFinder
  ☆14Updated 6 months ago
• mandricigor / imrep
  ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.
  ☆28Updated 5 years ago
• pdxgx / neoepiscope
  predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data
  ☆26Updated last year
• athchen / beer
  Bayesian enrichment estimation in R
  ☆10Updated 2 years ago
• splicebox / MntJULiP
  Comprehensive and scalable differential splicing analyses
  ☆14Updated 6 months ago
• openvax / isovar
  Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence
  ☆25Updated 3 months ago
• gerstung-lab / deepSNV
  The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.
  ☆14Updated 2 years ago
• ulelab / ultraplex
  Ultra-fast 5' and 3' demultiplexer
  ☆26Updated 8 months ago
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆38Updated 2 years ago
• BIMSBbioinfo / HOT-or-not-examining-the-basis-of-high-occupancy-target-regions
  HOT regions paper
  ☆11Updated 5 years ago
• genemine / iread
  iread
  ☆23Updated 3 years ago
• MarioniLab / sarlacc
  The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…
  ☆13Updated 5 years ago
• santiago1234 / iCodon
  iCodon customizes gene expression based on the codon composition
  ☆14Updated last year
• gagneurlab / absplice
  ☆33Updated 4 months ago
• developerpiru / BEAVR
  BEAVR: A Browser-based tool for the Exploration And Visualization of RNAseq data
  ☆24Updated 2 years ago
• vanallenlab / retained-intron-neoantigen-pipeline
  Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.
  ☆28Updated 3 years ago
• pachterlab / qcbc
  ☆19Updated last month
• AmpliconSuite / AmpliconReconstructorOM
  Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data
  ☆16Updated last year
• pinellolab / CRISPRitz
  Tool package to perform in-silico CRISPR analysis and assessment
  ☆22Updated 8 months ago
• finkelsteinlab / freebarcodes
  FREE Divergence Error-Correcting DNA Barcodes
  ☆8Updated 6 years ago
• cnobles / iGUIDE
  Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…
  ☆21Updated last month