A toolkit to bulk-submission, download, analysis and summarizing data from abYsis.org
☆10Apr 20, 2020Updated 6 years ago
Alternatives and similar repositories for abYsis-toolkit
Users that are interested in abYsis-toolkit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads☆16Dec 5, 2023Updated 2 years ago
- The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability☆14Sep 8, 2023Updated 2 years ago
- A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…☆32Oct 6, 2022Updated 3 years ago
- Sapiens is a human antibody language model based on BERT.☆78Jan 22, 2026Updated 5 months ago
- ☆26May 14, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python package for analysis of antibody heavy and light chains☆26Aug 16, 2020Updated 5 years ago
- AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data☆11May 19, 2019Updated 7 years ago
- ☆24Apr 10, 2025Updated last year
- Predict the structure of immune receptor proteins☆60Nov 8, 2024Updated last year
- Solvent Accessible Surface calculation software for biomolecules.☆19Apr 23, 2023Updated 3 years ago
- ☆14May 26, 2020Updated 6 years ago
- Examples of applications of pymbar to various problems in simulation and experiment☆24Jan 16, 2015Updated 11 years ago
- Cloud GPU supported NAMD3-based binding free energy difference between two small molecules against the same protein target. This is prob…☆29Nov 2, 2025Updated 8 months ago
- Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses☆16Mar 23, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- IMGT segment library converted to RepSeq.IO JSON format☆14Mar 21, 2023Updated 3 years ago
- Protein interaction calculator☆15Feb 11, 2025Updated last year
- STREAM2: Fast, scalable, and interactive trajectory analysis of single-cell omics data☆13Apr 1, 2024Updated 2 years ago
- Software for Ontogenic aNalysis of Antibody Repertoires☆19Jun 30, 2026Updated 2 weeks ago
- BSMN common data processing pipeline☆11Jun 6, 2025Updated last year
- Pipelines and tools for MRI analysis☆12Jun 14, 2023Updated 3 years ago
- R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.☆17Aug 26, 2025Updated 10 months ago
- https://www.nature.com/articles/s41598-020-74091-z#Tab1☆41Mar 13, 2024Updated 2 years ago
- ☆10Feb 18, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆13Sep 21, 2023Updated 2 years ago
- test☆14Nov 13, 2020Updated 5 years ago
- GUI for batch primer design with graphical output for PCR and SNP detection☆17Jun 28, 2026Updated 2 weeks ago
- Absolve antibody variable domain sequence analysis☆18Sep 13, 2018Updated 7 years ago
- Emap2sec is a computational tool to identify protein secondary structures☆16Jul 31, 2024Updated last year
- EvoEF + evolutionary profile for ddG_bind prediction☆15Oct 17, 2025Updated 8 months ago
- MTAE-based 5UTR design model☆10Jan 23, 2024Updated 2 years ago
- A Python3 script for removal of outlier sequences from a multiple sequence alignment (FASTA format).☆10Jul 6, 2026Updated last week
- 在R语言中使用ChatGPT（中国大陆版）☆12Mar 17, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A Course on designing high-throughput experiments☆13Sep 25, 2024Updated last year
- ☆12Apr 21, 2026Updated 2 months ago
- A highly scalable and accurate inference of gene expression and structure for single-cell transcriptomes using semi-supervised deep learn…☆12May 19, 2021Updated 5 years ago
- A package for the analysis of Imaging Mass Cytometry data☆15Mar 25, 2026Updated 3 months ago
- ☆31May 22, 2023Updated 3 years ago
- ☆11Jan 2, 2021Updated 5 years ago
- a tool for annotation of immunoglobulin genes in genome assemblies☆15Sep 22, 2025Updated 9 months ago