mikessh / migmapLinks
HTS-compatible wrapper for IgBlast V-(D)-J mapping tool
☆53Updated last year
Alternatives and similar repositories for migmap
Users that are interested in migmap are comparing it to the libraries listed below
Sorting:
- IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:☆52Updated last month
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆62Updated this week
- A RepSeq processing swiss-knife☆41Updated last year
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Updated 6 years ago
- A pipeline for complete and accurate recovery of TCR repertoires from high throughput sequencing data.☆23Updated 2 years ago
- ☆48Updated 3 years ago
- ☆38Updated 2 years ago
- off-targeting assessment of Cas9 gRNAs☆15Updated 4 years ago
- Bioinformatic pipeline for identifying dsDNA breaks by marker based incorporation, such as breaks induced by designer nucleases like Cas9…☆22Updated 6 months ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆95Updated 3 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- A guide to running MaxQuant in Linux☆35Updated 6 years ago
- This script use to analyze the immune repertoire sequenced by high throughtput sequencing☆27Updated 4 years ago
- Multi-Omics Peptide Generator☆30Updated 3 months ago
- predicting peptide and TCR interaction☆20Updated 5 years ago
- Predicting gene expression levels from genomic sequences☆54Updated 5 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Updated 5 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated 2 months ago
- IMGT segment library converted to RepSeq.IO JSON format☆13Updated 2 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆90Updated 3 months ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- Code and data used in The Great Repertoire Project☆29Updated 4 years ago
- Python biomart API☆69Updated 2 years ago
- BAGEL software☆28Updated 2 years ago
- FREE Divergence Error-Correcting DNA Barcodes☆28Updated last year
- Parsing tools for GTF (gene transfer format) files☆125Updated 11 months ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆47Updated 9 years ago
- Efficient algorithms for designing orthogonal DNA sequence libraries☆13Updated last year
- IPAW: a Nextflow workflow for proteogenomics☆29Updated last year
- Analysis pipeline for the GUIDE-seq assay.☆29Updated 6 months ago