Conversion of a BAM alignment to wiggle and bigwig coverage files, with flexible reporting options
☆16May 7, 2019Updated 7 years ago
Alternatives and similar repositories for bam2wig
Users that are interested in bam2wig are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Illumina read substitution and indel error corrector. Processes human WGS 45x depth reads in about 4 hours, resulting in the reads qualit…☆10Sep 17, 2026Updated last month
- R interface to megadepth: BigWig and BAM related utilities☆14Mar 31, 2026Updated 7 months ago
- ☆15Aug 25, 2022Updated 4 years ago
- The Self-Assembling-Manifold (SAM) algorithm.☆51Dec 26, 2025Updated 10 months ago
- ☆20Sep 28, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- omniCLIP is a CLIP-Seq peak caller☆16Nov 14, 2020Updated 5 years ago
- ☆10Mar 5, 2019Updated 7 years ago
- ☆12Aug 28, 2015Updated 11 years ago
- ☆10Mar 11, 2025Updated last year
- A comprehensive and intelligent clinical phasing tool☆15Dec 3, 2022Updated 3 years ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- Suite of analysis tools for spatial total RNA-sequencing☆13Aug 10, 2023Updated 3 years ago
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- Adaptive haplotype assembly for efficiently leveraging high coverage in long reads☆13Sep 4, 2018Updated 8 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Falcon2Fastg is a tool for converting a FALCON assembly to FASTG format to visualize with Bandage☆13May 16, 2016Updated 10 years ago
- GitKraken lesson (forked from HBS-RCS)☆10Mar 20, 2026Updated 7 months ago
- multi-tool QC for minion data☆11May 28, 2018Updated 8 years ago
- Piranha is a peak-caller for CLIP- and RIP-seq data☆21Feb 7, 2018Updated 8 years ago
- Noise-Cancelling Repeat Finder☆27Apr 2, 2026Updated 6 months ago
- CLIP sequencing analysis pipeline for QC, pre-mapping, genome mapping, UMI deduplication, and multiple peak-calling options.☆26Jul 28, 2026Updated 3 months ago
- ☆13Jan 31, 2026Updated 9 months ago
- ORF Quantification pipeline for Alternative Splicing☆17May 11, 2021Updated 5 years ago
- ☆10Dec 5, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Machine Learning-based tool to assess the functional relevance of splice isoforms.☆12Feb 8, 2023Updated 3 years ago
- Long read to reference genome mapping tool☆13Mar 14, 2024Updated 2 years ago
- A Shiny-based framework to analyze and visualize interactively genomic data☆11May 11, 2023Updated 3 years ago
- ☆13Jan 6, 2021Updated 5 years ago
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆12Mar 3, 2017Updated 9 years ago
- Find CpG islands in genome☆11Mar 27, 2020Updated 6 years ago
- Pipelines for re-analysis of iCLIP and scRNA-Seq data for UMI-tools publication☆11Jun 13, 2022Updated 4 years ago
- Extract data quickly from Juicebox via straw☆70Apr 6, 2025Updated last year
- ☆13Oct 9, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Alignment-based Scrubbing pipeline☆21Mar 14, 2024Updated 2 years ago
- Detection of Circular RNA and Fusions from RNA-Seq☆32Aug 14, 2018Updated 8 years ago
- Somatic indel discovery tool for tumor RNA-Seq data.☆24Nov 21, 2025Updated 11 months ago
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆14Jan 9, 2026Updated 9 months ago
- Layout module for raw de novo genome assembly of long uncorrected reads.☆21Feb 2, 2021Updated 5 years ago
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- ENCODE DNase-seq pipeline essentials for running on dnanexus.☆12Sep 25, 2019Updated 7 years ago