Conversion of a BAM alignment to wiggle and bigwig coverage files, with flexible reporting options
☆16May 7, 2019Updated 6 years ago
Alternatives and similar repositories for bam2wig
Users that are interested in bam2wig are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R interface to megadepth: BigWig and BAM related utilities☆13Mar 31, 2026Updated 2 weeks ago
- ☆20Sep 28, 2019Updated 6 years ago
- omniCLIP is a CLIP-Seq peak caller☆16Nov 14, 2020Updated 5 years ago
- ☆15Aug 25, 2022Updated 3 years ago
- ☆10Mar 11, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- Atom language support for Tmux config file☆11Nov 3, 2021Updated 4 years ago
- iFISH Probe Design: a Python3 package to build iFISH probes.☆12Mar 11, 2022Updated 4 years ago
- Adaptive haplotype assembly for efficiently leveraging high coverage in long reads☆13Sep 4, 2018Updated 7 years ago
- Noise-Cancelling Repeat Finder☆27Apr 2, 2026Updated last week
- Piranha is a peak-caller for CLIP- and RIP-seq data☆20Feb 7, 2018Updated 8 years ago
- Long read to reference genome mapping tool☆13Mar 14, 2024Updated 2 years ago
- Falcon2Fastg is a tool for converting a FALCON assembly to FASTG format to visualize with Bandage☆13May 16, 2016Updated 9 years ago
- ORF Quantification pipeline for Alternative Splicing☆16May 11, 2021Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- GitKraken lesson (forked from HBS-RCS)☆10Mar 20, 2026Updated 3 weeks ago
- Alignment-based Scrubbing pipeline☆21Mar 14, 2024Updated 2 years ago
- ☆10Dec 5, 2022Updated 3 years ago
- A comprehensive and intelligent clinical phasing tool☆14Dec 3, 2022Updated 3 years ago
- A Shiny-based framework to analyze and visualize interactively genomic data☆11May 11, 2023Updated 2 years ago
- Extract data quickly from Juicebox via straw☆70Apr 6, 2025Updated last year
- Layout module for raw de novo genome assembly of long uncorrected reads.☆21Feb 2, 2021Updated 5 years ago
- Model-based analysis of APA using 3' end-linked reads☆12Aug 14, 2021Updated 4 years ago
- Bullseye analysis pipeline for DART-seq analysis☆15Feb 28, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ENCODE DNase-seq pipeline essentials for running on dnanexus.☆12Sep 25, 2019Updated 6 years ago
- ATAC_seq Workshop☆13Feb 16, 2018Updated 8 years ago
- Find CpG islands in genome☆11Mar 27, 2020Updated 6 years ago
- Filter of Pairwise Alignement☆44Jan 31, 2022Updated 4 years ago
- Lightweight Alignment Based Resolution of Alternative Three Prime Ends☆10Jan 26, 2024Updated 2 years ago
- Exploring Isoform-specific interactions☆13Sep 16, 2025Updated 6 months ago
- Scaffolding with Ultralong Reads☆15Nov 11, 2020Updated 5 years ago
- Paired Replicate Analysis of Allelic Differential Splicing Events☆12Feb 21, 2023Updated 3 years ago
- A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.☆12Mar 3, 2017Updated 9 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Somatic indel discovery tool for tumor RNA-Seq data.☆24Nov 21, 2025Updated 4 months ago
- A python wrapper around SURVIVOR☆20Feb 15, 2024Updated 2 years ago
- Code for the meQTL analyses presented in Hawe et al. 2021 Nature Genetics☆14Jan 14, 2022Updated 4 years ago
- Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution"☆64Oct 15, 2020Updated 5 years ago
- A clustering algorithm that can perform internal validation inspired by forest fire dynamics and self-organized criticality☆18May 18, 2022Updated 3 years ago
- A read extraction and realignment tool for next generation sequencing data☆107Oct 29, 2022Updated 3 years ago
- Analyze antibody repertoires and discover new V genes from high-throughput sequencing reads☆16Dec 5, 2023Updated 2 years ago