Magdoll / AAVLinks
Scripts for analyzing PacBio AAV sequences
☆15Updated last year
Alternatives and similar repositories for AAV
Users that are interested in AAV are comparing it to the libraries listed below
Sorting:
- SV detection tool for nanopore sequence reads☆93Updated 3 months ago
- Variant calling tool for long-read sequencing data☆111Updated 4 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆29Updated last year
- Sequences from HIV Easily Reconstructed☆27Updated last year
- Minor Variant Calling and Phasing Tools☆15Updated 3 years ago
- PrimerServer2: a high-throughput primer design and specificity-checking platform☆78Updated 2 years ago
- TIDDIT - structural variant calling☆74Updated 3 months ago
- Flexible circular visualization of genome-associated data with BioPerl and SVG.☆47Updated 6 years ago
- A catalogue of available long read sequencing data analysis tools☆78Updated 4 months ago
- De novo clustering of long transcript reads into genes☆67Updated 2 months ago
- WDL’s and Dockerfiles for assembly QC process☆67Updated last week
- FamDB file format library and utilities☆28Updated 2 weeks ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated last year
- 🏔 coverage extraction from BAM/CRAM files, supporting targets 📊☆64Updated 3 weeks ago
- new repo☆28Updated 4 years ago
- ☆49Updated 8 months ago
- A versatile toolkit for k-mers with taxonomic information☆78Updated 11 months ago
- Toolkit for calling structural variants using short or long reads☆107Updated last month
- ☆35Updated last month
- Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.☆42Updated 2 weeks ago
- ClairS - a deep-learning method for long-read somatic small variant calling☆86Updated last week
- Python bindings to bwa mem☆32Updated 5 years ago
- ☆116Updated last year
- Creating alignment plots from bam files☆65Updated this week
- reference-free transcriptome assembly for short and long reads☆108Updated last year
- a hidden Markov model to infer simple repeats from genome sequences☆37Updated 4 years ago
- ☆63Updated 2 years ago
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated last year
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated 2 months ago
- Tools for detecting DNA modifications from single molecule, real-time sequencing data☆25Updated 3 years ago