Magdoll / AAVLinks
Scripts for analyzing PacBio AAV sequences
☆15Updated last year
Alternatives and similar repositories for AAV
Users that are interested in AAV are comparing it to the libraries listed below
Sorting:
- Sequences from HIV Easily Reconstructed☆28Updated last year
- SV detection tool for nanopore sequence reads☆97Updated last month
- Nanopore Plasmid Sequencing☆34Updated 2 years ago
- Python bindings for the TaxonKit library☆43Updated last week
- Learning and Aligning Large Protein Families with support of protein language models.☆30Updated this week
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆110Updated 2 weeks ago
- ☆39Updated last month
- Variant calling tool for long-read sequencing data☆117Updated 10 months ago
- Reference-guided multiple sequence alignment of viral genomes☆70Updated 3 months ago
- seqfu - Sequece Fastx Utilities☆126Updated last week
- A simple command-line tool to download data from Joint Genome Institute databases☆51Updated 3 years ago
- Creating alignment plots from bam files☆107Updated this week
- ☆133Updated last year
- A versatile compressor of third generation sequencing reads.☆52Updated last year
- A genome browser in your Jupyter notebook☆31Updated 8 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated 2 months ago
- Fast and flexible ORF finder☆78Updated 4 years ago
- Flash2 has some improvements from flash_1 including new logic from innie and outie overlaps as well as some initial steps for flash for a…☆51Updated 8 years ago
- ☆28Updated 5 years ago
- BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale☆57Updated 2 years ago
- Detection of incorrectly labeled sequences across kingdoms☆88Updated 3 years ago
- An R package designed for drawing gene arrow maps☆95Updated 4 months ago
- gatk4 RNA variant calling pipeline☆59Updated 2 weeks ago
- reference-free transcriptome assembly for short and long reads☆108Updated 2 years ago
- Protein Alignment and Detection Interface☆60Updated last year
- A versatile toolkit for k-mers with taxonomic information☆82Updated 5 months ago
- ☆31Updated last year
- ARTIC SARS-CoV-2 workflow and reporting☆50Updated 9 months ago
- FastOMA is a scalable software package to infer orthology relationship.☆90Updated 2 weeks ago
- Desktop application for colouring/shading sequence alignments☆29Updated 3 years ago