epi2me-labs / wf-clone-validationLinks
☆38Updated 3 months ago
Alternatives and similar repositories for wf-clone-validation
Users that are interested in wf-clone-validation are comparing it to the libraries listed below
Sorting:
- Variant calling tool for long-read sequencing data☆111Updated 6 months ago
- ☆45Updated 3 weeks ago
- ARTIC SARS-CoV-2 workflow and reporting☆50Updated 4 months ago
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆105Updated 3 months ago
- a tool for inferring species tree from sequencing reads☆151Updated 2 weeks ago
- Research release basecalling models and configurations☆115Updated 3 months ago
- Visualise and analyse nanopore (ONT) raw signals☆121Updated 2 weeks ago
- Bioinformatics tool for Locus Visualisation☆122Updated 4 months ago
- Catalog of genomic indexes freely available from public clouds☆62Updated last month
- A post sequencing QC tool for Oxford Nanopore sequencers☆102Updated last month
- Read Until client library for Nanopore Sequencing☆104Updated 11 months ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆82Updated 3 years ago
- List of genome assembly tools☆76Updated 2 weeks ago
- Simple bacterial assembly and annotation pipeline☆77Updated last week
- seqfu - Sequece Fastx Utilities☆120Updated 8 months ago
- A local-haplotagging-based small and structural variant caller☆80Updated 3 weeks ago
- nanodisco: a toolbox for discovering and exploiting multiple types of DNA methylation from individual bacteria and microbiomes using nano…☆70Updated 3 years ago
- Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.☆32Updated 2 weeks ago
- Snakemake workflow for metagenomic classification with Kraken2☆65Updated 2 years ago
- ☆38Updated last year
- Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.☆41Updated last month
- The NanoPipe pipeline analyzes reads generated by the Oxford Nanopore sequencing devices. As a result, it provides alignments to any targ…☆18Updated 6 years ago
- Protein hint generation pipeline for gene finding in eukaryotic genomes☆60Updated last year
- ☆131Updated last year
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- Antibiotic resistance prediction in minutes☆111Updated 9 months ago
- Assembled Genomes Compressor☆168Updated 9 months ago
- Renders a collection of sequences into a pangenome graph. https://doi.org/10.1093/bioinformatics/btae609.☆96Updated last week
- Kmer-db is a fast and memory-efficient tool for large-scale k-mer analyses (indexing, querying, estimating evolutionary relationships, et…☆93Updated 4 months ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆69Updated 4 years ago