A collection of open source bioinformatics tools developed and used by Addgene.
☆11Sep 9, 2025Updated 6 months ago
Alternatives and similar repositories for openbio
Users that are interested in openbio are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A software tool for personalized and allele-specific CRISPR editing.☆18Feb 1, 2022Updated 4 years ago
- Single sample network reconstruction in R☆24Apr 6, 2020Updated 5 years ago
- This repository contains FAQs (Frequently Asked Questions) for genome in a bottle project☆10Sep 28, 2018Updated 7 years ago
- http://tinyurl.com/cruk-shiny☆10Sep 13, 2017Updated 8 years ago
- Simple tool to verticalize text delimited files.☆37May 6, 2024Updated last year
- pGWAS and functional filtering pipeline to identify candidate adaptive genetic traits in bacteria☆11Feb 6, 2018Updated 8 years ago
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- Deep proteome inference from peptide profiles☆13Jul 16, 2020Updated 5 years ago
- Gene Set Enrichment Analysis in Python☆11Oct 26, 2018Updated 7 years ago
- Proteome Generator☆10Apr 18, 2019Updated 6 years ago
- A pipeline for whole genome assembly☆16Apr 21, 2022Updated 3 years ago
- Tools for building and working with docker containers in R☆20Dec 2, 2019Updated 6 years ago
- Course on good principles & practices in Data Management (https://tinyurl.com/cruk-myrd)☆18May 2, 2023Updated 2 years ago
- SpydrPick: mutual information based detection of pairs of genomic loci co-evolving under a shared selective pressure.☆15Apr 29, 2022Updated 3 years ago
- ☆20Feb 13, 2026Updated last month
- A pipeline for Human GWAS analysis that accomodates both Affymetrix (raw .CEL files) and Illumina (Plink binaries) data☆12May 14, 2018Updated 7 years ago
- EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence☆33Sep 1, 2023Updated 2 years ago
- Utility program for extracting sequences from a fasta/fastq file☆35Dec 23, 2024Updated last year
- ☆15May 16, 2019Updated 6 years ago
- km : a software for RNA-seq investigation using k-mer decomposition☆10Apr 8, 2025Updated 11 months ago
- Manipulate genomic features and validate the syntax and reference sequence of your GFF3 files☆10Dec 26, 2022Updated 3 years ago
- Single cell interactive plotting tools☆24Jun 12, 2020Updated 5 years ago
- ☆11Jun 26, 2020Updated 5 years ago
- Estimate PTM hotspots in protein sequence alignments☆15Feb 6, 2019Updated 7 years ago
- Public repository for the biodata resource inventory performed in 2022.☆11Nov 25, 2025Updated 3 months ago
- Finding putative exons and constructing splicegraphs using Trans-ABySS contigs☆11Nov 8, 2018Updated 7 years ago
- Convert statistical analysis objects from R into tidy format☆25Feb 4, 2023Updated 3 years ago
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Jul 3, 2012Updated 13 years ago
- ProkEvo - an automated, reproducible, and scalable framework for high-throughput bacterial population genomics analyses.☆18Aug 16, 2021Updated 4 years ago
- Quantifying the significance of genetic variation using probabilistic profile-based methods.☆19Apr 21, 2021Updated 4 years ago
- Core code for the DeepHF prediction tool☆40Jul 23, 2019Updated 6 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆15May 12, 2025Updated 10 months ago
- ☆16Dec 7, 2020Updated 5 years ago
- Selective and Recursive local Assembler☆15Jan 31, 2022Updated 4 years ago
- Promoter activity measurement and modeling; artificial promoter design and testing☆13Mar 24, 2023Updated 2 years ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Feb 12, 2016Updated 10 years ago
- ☆16Jan 9, 2024Updated 2 years ago
- ⚖️ R code to scrape the DoJ Capitol Breach Cases and daily data files of said scraped info via GH actions☆24Nov 6, 2024Updated last year
- 这是一个专门用于浏览和管理 ComfyUI 生成的图片文件，当然其他目录的图片也可以。☆10Dec 20, 2024Updated last year