addgene / openbioLinks
A collection of open source bioinformatics tools developed and used by Addgene.
☆11Updated 2 weeks ago
Alternatives and similar repositories for openbio
Users that are interested in openbio are comparing it to the libraries listed below
Sorting:
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 10 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆20Updated 9 months ago
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆16Updated 3 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Updated 11 months ago
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- interactive plots for differential expression analysis☆34Updated 3 months ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 6 years ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- TOP results by CONfident efFECT Sizes.☆14Updated 9 months ago
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generat…☆28Updated 8 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆29Updated 6 months ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Visualization tool for genetic reassortment☆21Updated 5 months ago
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 8 months ago
- An academic manuscript template with writing tips in both LaTeX and MS Word format generated by the Capra Lab (2/2022)☆21Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆26Updated 3 months ago
- ☆29Updated 6 years ago
- Convert, explore, and manipulate GFF and GTF files (used in bioinformatics) using a sqlite-based approach☆36Updated 14 years ago
- ☆13Updated 2 years ago
- Genomic plot in trellis layout☆41Updated last year
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- R package for WikiPathways API☆17Updated 3 weeks ago