barricklab / pLannotateLinks
Webserver and command line tool for annotating engineered plasmids
☆17Updated last year
Alternatives and similar repositories for pLannotate
Users that are interested in pLannotate are comparing it to the libraries listed below
Sorting:
- A PCR primer tool for DNA assembly flows☆33Updated last year
- Software for predicting translation initiation rates in bacteria☆30Updated 5 months ago
- Webserver and command line tool for annotating engineered plasmids☆135Updated 5 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆77Updated last month
- MSA(Multiple Sequence Alignment) visualization python package for sequence analysis☆172Updated last year
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆85Updated 3 years ago
- Protein structure alignment and search algorithm☆77Updated last week
- Models, design algorithms, and other software related to Salis lab publications☆35Updated last year
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆43Updated 3 weeks ago
- UniProt Id Mapping through API☆36Updated 3 months ago
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆64Updated 7 months ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- Codon usage tables in code-friendly format + Python bindings☆42Updated 8 months ago
- Python library to visualize circular plasmid maps☆28Updated 4 years ago
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆47Updated 3 weeks ago
- Nanopore Plasmid Sequencing☆34Updated 2 years ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆38Updated 7 months ago
- Comprehensive Python client for the Uniprot REST API☆54Updated 3 months ago
- Deep learning embedding for nucleotide sequences☆19Updated 9 months ago
- iCodon customizes gene expression based on the codon composition☆15Updated 2 years ago
- Multi-class signal peptide prediction and structure decoding model.☆102Updated 11 months ago
- Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.☆18Updated last year
- nucleic acid folding☆109Updated 4 months ago
- Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.☆37Updated this week
- A Python project to read and write Snapgene *.dna into dict, json, and biopython object.☆45Updated 5 years ago
- software for the analysis and visualization of deep mutational scanning data☆34Updated 3 years ago
- RNA secondary structure/sequence profiles for homology search and alignment☆121Updated 3 weeks ago
- BGC Detection and Classification Using Deep Learning☆157Updated 2 years ago
- Protein Sequence Annotation with Language Models☆25Updated last week
- Protein 3D structure prediction pipeline☆92Updated 3 weeks ago