Anno is a variant annotation tool
☆24May 18, 2016Updated 10 years ago
Alternatives and similar repositories for anno
Users that are interested in anno are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Rare variant test software for next generation sequencing data☆142Jan 26, 2022Updated 4 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 5 months ago
- A simple observation count database☆11Jan 13, 2026Updated 4 months ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆33Feb 23, 2026Updated 3 months ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Gene orthologs for model organisms in a tidy data format☆15Sep 29, 2022Updated 3 years ago
- ☆40Jan 24, 2018Updated 8 years ago
- Annotation of Genetic Variants☆31Apr 28, 2026Updated 3 weeks ago
- seqcover allows users to view coverage for hundreds of genes and dozens of samples☆51Apr 9, 2021Updated 5 years ago
- R package for creating simulated summary statistics and testing MR methods☆12Sep 2, 2020Updated 5 years ago
- mtDNA Variant Caller☆35Dec 23, 2024Updated last year
- Linking GWAS studies to genes through cis-regulatory datasets☆39Feb 11, 2023Updated 3 years ago
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆90Updated this week
- Library for visualising genomic features in Python.☆15May 12, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Single-pass probabilistic duplicate marking of alignments with a Bloom filter.☆24Aug 7, 2023Updated 2 years ago
- Code for implementing Mendelian randomization investigations☆20Nov 9, 2015Updated 10 years ago
- A lightweight, alignment-free utility for detecting repeat-containing reads in short-read WGS, WES and RNA-seq data.☆18Jan 16, 2026Updated 4 months ago
- Simplify snpEff annotations for interesting cases☆22Feb 18, 2019Updated 7 years ago
- R/Shiny package for network-integrated pathway enrichment analysis☆14Dec 2, 2020Updated 5 years ago
- Statistical analysis for spatial omics data☆11Jul 30, 2022Updated 3 years ago
- A comprehensive and intelligent clinical phasing tool☆14Dec 3, 2022Updated 3 years ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- Contains the description of a file format to store kmers and associated values☆34Aug 17, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scripts for GWAS association and metaanalysis☆43Dec 8, 2020Updated 5 years ago
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆17Jan 23, 2023Updated 3 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Nov 4, 2019Updated 6 years ago
- A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.☆167May 9, 2025Updated last year
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆13Mar 16, 2026Updated 2 months ago
- Extends miniwdl to run workflows on AWS Batch & EFS☆22Feb 5, 2024Updated 2 years ago
- Pariwise analysis of GWAS☆47Sep 27, 2018Updated 7 years ago
- This repo is be archived, these workflows are still housed housed in the GATK repository under the scripts directory. The workflows are a…☆22Mar 9, 2020Updated 6 years ago
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Hidden Markov Model based Copy number caller☆20Dec 9, 2025Updated 5 months ago
- Benchmarking variant calling in polyploids☆16Nov 26, 2021Updated 4 years ago
- De Bruijn graph construction for large k.☆17Aug 31, 2021Updated 4 years ago
- a toolset for fast DNA read set matching and assembly using a new type of reduced kmer☆37Aug 4, 2021Updated 4 years ago
- An interactive graphical illustration of genetic associations and their biological context☆17Mar 14, 2024Updated 2 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Sep 27, 2016Updated 9 years ago
- Tidy methods for Bayesian treatment effect models☆18Dec 8, 2025Updated 5 months ago