gchure / reproducible_website

Related projects ⓘ

Alternatives and complementary repositories for reproducible_website

• quantixed / manuscript-templates
  LaTeX templates for manuscripts. bioRxiv preprint and journal submission templates. For use on Overleaf.
  ☆69Updated 5 months ago
• chrelli / bioRxiv-word-template
  MS Word template for styling a manuscript for a bioRxiv submission
  ☆33Updated 5 years ago
• bionumpy / bionumpy
  Python library for array programming on biological datasets. Documentation available at: https://bionumpy.github.io/bionumpy/
  ☆240Updated this week
• fayjustin / computational_biology
  course material
  ☆122Updated last year
• iskandr / bcb731
  Defense Against the Dark Arts
  ☆77Updated 10 months ago
• crazyhottommy / The-world-of-faculty
  resources for faculty
  ☆208Updated last year
• evanpeikon / math_for_compbio
  This repository contains math tutorials I created for Bioinformatics and Computational Biology.
  ☆74Updated 2 months ago
• deanslee / FigureOneLab
  Hone computational biology skills by re-enacting Figure 1 of modern biology papers
  ☆186Updated 3 months ago
• bio-learn / biolearn
  Machine learning tools for biomarker analysis
  ☆47Updated last week
• slowkow / awesome-vdj
  📚 Tools and databases for analyzing HLA and VDJ genes.
  ☆210Updated 6 months ago
• j-andrews7 / awesome-bioinformatics-benchmarks
  A curated list of bioinformatics bench-marking papers and resources.
  ☆315Updated 3 months ago
• melbournebioinformatics / MelBioInf_docs
  Melbourne Bioinformatics documentation in markdown format
  ☆101Updated this week
• jmschrei / tangermeme
  Biological sequence analysis for the modern age.
  ☆191Updated last week
• latch-verified / bulk-rnaseq
  Bulk RNA-seq analysis.
  ☆35Updated last year
• hmsrc / user-training
  HMS Research Computing User Training
  ☆90Updated last week
• GuyTeichman / RNAlysis
  Analyze your RNA sequencing data without writing a single line of code
  ☆129Updated last month
• saezlab / decoupler-py
  Python package to perform enrichment analysis from omics data.
  ☆166Updated 2 months ago
• omgenomics / bio-data-zoo
  Example genomics data for tool developers
  ☆94Updated 4 months ago
• BIMSBbioinfo / compgen2021
  ☆73Updated 3 years ago
• gchure / reproducible_research
  A template repository for how I structure my scientific research
  ☆91Updated 6 months ago
• ayixon / RaPDTool
  Rapid Profiling and Deconvolution Tool for Metagenomes
  ☆112Updated 7 months ago
• churchmanlab / genewalk
  GeneWalk identifies relevant gene functions for a biological context using network representation learning
  ☆128Updated 3 months ago
• mmcguffi / pLannotate
  Webserver and command line tool for annotating engineered plasmids
  ☆108Updated 7 months ago
• scverse / muon
  muon is a multimodal omics Python framework
  ☆218Updated 3 weeks ago
• harvardinformatics / bioinformatics-coffee-hour
  Short lessons from FAS Informatics coffee hour
  ☆141Updated last year
• immunitastx / coding_exercise_TCGA_infiltration
  coding exercise using TCGA immune infiltration data
  ☆43Updated 9 months ago
• SysBioChalmers / RAVEN
  The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.
  ☆101Updated last week
• crazyhottommy / machine-learning-resource
  ☆72Updated last month
• pachterlab / kb_python
  A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing
  ☆154Updated last month
• Teichlab / celltypist
  A tool for semi-automatic cell type classification
  ☆296Updated 5 months ago