PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs
☆54Oct 28, 2025Updated last year
Alternatives and similar repositories for primerTree
Users that are interested in primerTree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A web app for environmental DNA metabarcoding analysis☆11Dec 30, 2021Updated 4 years ago
- In-silico PCR amplification on complete genomes☆11Oct 19, 2026Updated 2 weeks ago
- GUI for batch primer design with graphical output for PCR and SNP detection☆17Jun 28, 2026Updated 4 months ago
- PrimerServer2: a high-throughput primer design and specificity-checking platform☆84Dec 5, 2022Updated 3 years ago
- A reference database manager for R☆13Feb 27, 2026Updated 8 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- 🧬 Unique (& conserved) DNA sequence identification☆20Jun 4, 2026Updated 4 months ago
- PCR Primer Quality Control☆78Oct 15, 2026Updated 2 weeks ago
- ☆20Aug 19, 2026Updated 2 months ago
- Design capture probes☆10Apr 28, 2025Updated last year
- Scripts for analyzing Illumina-generated environmental DNA sequence data.☆21Feb 22, 2018Updated 8 years ago
- A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.☆13Aug 19, 2024Updated 2 years ago
- An open-source data management system for tracking environmental DNA samples and metadata☆16Aug 8, 2024Updated 2 years ago
- eDNA metabarcoding pipeline☆50Sep 10, 2026Updated last month
- Optimise PCR primer-set grouping for genetics research☆21Oct 16, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Design primers for species-specific qPCR☆10Jun 1, 2017Updated 9 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Feb 14, 2023Updated 3 years ago
- ThermoAlign: software for automated primer design☆27Apr 14, 2018Updated 8 years ago
- Whole genome focused array SNP typer☆14Feb 2, 2026Updated 9 months ago
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆26Oct 24, 2026Updated last week
- Searching DNA/RNA sequence databases with PCR and/or probe queries☆27Feb 23, 2026Updated 8 months ago
- Executable files for usearch versions 5 through 11, donated to the public domain☆24Jun 15, 2024Updated 2 years ago
- ☆13Jun 1, 2021Updated 5 years ago
- Web interface for Kaptive, the tool for in silico serotyping☆11Aug 7, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago
- In-silico PCR, primer design and padlock design for in-situ sequencing☆55Aug 19, 2026Updated 2 months ago
- ☆17May 1, 2025Updated last year
- A toolkit to design standard primers, multiplexed primers, and primers around SV's☆13Oct 29, 2022Updated 4 years ago
- CGM 主站☆11Jun 8, 2026Updated 4 months ago
- A systematic/quantitative review of articles, which provides a basis for identifying what has been done so far in the field of plant path…☆23Aug 8, 2024Updated 2 years ago
- SURPI☆86May 10, 2016Updated 10 years ago
- Advanced Vegan Workshop for ESA☆18Aug 7, 2017Updated 9 years ago
- Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).☆310Aug 2, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- eXtasy: Variant Prioritization by Genomic Data Fusion☆13Feb 19, 2014Updated 12 years ago
- Host depletion optimised for clinical metagenomic sequencing applications☆19Jul 9, 2026Updated 3 months ago
- A Go implementation of the strobemers (https://github.com/ksahlin/strobemers)☆14Apr 23, 2021Updated 5 years ago
- Written by Emily Curd (eecurd@g.ucla.edu), Jesse Gomer (jessegomer@gmail.com), Gaurav Kandlikar (gkandlikar@ucla.edu), Zack Gold (zjgold@…☆49Jan 18, 2024Updated 2 years ago
- microbes-dbs utilities to fetch microbe relevant databases☆10Jul 24, 2022Updated 4 years ago
- Automatically design multiplex PCR primer pairs for diverse templates☆37May 23, 2024Updated 2 years ago
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago