A comprehensive tutorial about GWAS and PRS
☆980Apr 1, 2023Updated 3 years ago
Alternatives and similar repositories for GWA_tutorial
Users that are interested in GWA_tutorial are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆75Feb 4, 2021Updated 5 years ago
- Codebook from my GWAS cookbook☆194May 26, 2022Updated 3 years ago
- GWAS Tutorial for Beginners☆411Apr 17, 2026Updated last week
- Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release☆383Jun 7, 2023Updated 2 years ago
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆204Apr 10, 2026Updated 2 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- LD Score Regression (LDSC)☆778Jan 16, 2026Updated 3 months ago
- 📊 Circular and Rectangular Manhattan Plot☆631Feb 25, 2026Updated 2 months ago
- ☆197May 2, 2022Updated 3 years ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆207Jul 6, 2023Updated 2 years ago
- Genome-wide Association Study (GWAS) Tutorial☆40Apr 12, 2019Updated 7 years ago
- A tutorial on how to run basic polygenic risk score analysis☆85Jan 24, 2023Updated 3 years ago
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆292Apr 16, 2026Updated 2 weeks ago
- Repo for the R package coloc☆193Dec 4, 2025Updated 4 months ago
- Genome-wide association studies tutorial 🧬☆54Dec 2, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a c…☆498Updated this week
- MetaXcan software and manuscript☆193Jul 4, 2025Updated 9 months ago
- GWAS Pipeline for H3Africa☆115Mar 12, 2026Updated last month
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Oct 14, 2017Updated 8 years ago
- An R package for creating Q-Q and manhattan plots from GWAS results☆172Oct 27, 2025Updated 6 months ago
- methods for functional summary-based imputation☆102Mar 17, 2026Updated last month
- R package for quality control of plink genetic datasets☆65Mar 27, 2026Updated last month
- Polygenic prediction via continuous shrinkage priors☆200Nov 21, 2024Updated last year
- 二代测序数据分析☆379Dec 6, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- The PheWAS R package☆156Oct 13, 2025Updated 6 months ago
- A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool For Genome-Wide Association Study☆327Mar 11, 2026Updated last month
- Rare variant test software for next generation sequencing data☆141Jan 26, 2022Updated 4 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- R-package for structural equation modeling based on GWAS summary data☆275Apr 3, 2026Updated 3 weeks ago
- Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF☆162Feb 26, 2026Updated 2 months ago
- Linking GWAS data to analytical tools in R☆156May 20, 2022Updated 3 years ago
- High-definition likelihood inference of genetic correlations (HDL)☆135Mar 15, 2026Updated last month
- Official code repository for GATK versions 4 and up☆1,940Apr 23, 2026Updated last week
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆25Jan 8, 2026Updated 3 months ago
- R package for performing 2-sample MR using IEU OpenGWAS database☆541Apr 2, 2026Updated 3 weeks ago
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆180Mar 11, 2026Updated last month
- A repository for setting up a RNAseq workflow☆456Apr 10, 2017Updated 9 years ago
- Visualization of Colocalization Between eQTL and GWAS Data☆88May 13, 2022Updated 3 years ago
- Find causal cell-types underlying complex trait genetics☆95Feb 8, 2026Updated 2 months ago
- Genome-wide Efficient Mixed Model Association☆400Dec 10, 2025Updated 4 months ago