GWAS Pipeline for H3Africa
☆114Mar 12, 2026Updated last month
Alternatives and similar repositories for h3agwas
Users that are interested in h3agwas are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Mar 15, 2025Updated last year
- Genotype Imputation Pipeline for H3Africa☆24Nov 5, 2024Updated last year
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- Codebook from my GWAS cookbook☆194May 26, 2022Updated 3 years ago
- Consensus assembly and variant calling workflow.☆12May 26, 2015Updated 10 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Whole Genome Sequenceing Structural Variation Pipelines☆18Apr 4, 2019Updated 7 years ago
- ☆21Oct 24, 2020Updated 5 years ago
- H3ABioNet 16S rDNA diverstity analysis package☆19May 20, 2019Updated 6 years ago
- A pipeline for Human GWAS analysis that accomodates both Affymetrix (raw .CEL files) and Illumina (Plink binaries) data☆12May 14, 2018Updated 7 years ago
- Nextflow implementation of the smoove workflow and other tools for SV calling and QC☆12Nov 12, 2020Updated 5 years ago
- A Nextflow Genome-Wide Association Study (GWAS) Pipeline☆36Jun 26, 2025Updated 9 months ago
- ☆24Dec 10, 2018Updated 7 years ago
- Convert GWAS summary statistics to VCF☆48Mar 11, 2023Updated 3 years ago
- PRS pipeline using PRS_CS☆15Oct 21, 2025Updated 5 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A comprehensive tutorial about GWAS and PRS☆975Apr 1, 2023Updated 3 years ago
- Welcome to the website and github repository for the Genome Analysis Module. This website will guide the learning experience for trainees…☆26Nov 14, 2022Updated 3 years ago
- As part of the COVID-19 Host Genetics Global initative, this repo serves to corroborate sample scripts for sequencing QC.☆12Jul 30, 2020Updated 5 years ago
- tips and tricks in genome-wide association studies - a tutorial☆14Jul 25, 2023Updated 2 years ago
- Quality control steps for GWAS☆26Aug 11, 2023Updated 2 years ago
- GTEx & TOPMed data production and analysis pipelines☆401Sep 14, 2025Updated 7 months ago
- ☆58Apr 3, 2026Updated 2 weeks ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 7 years ago
- An R package for creating ggplot2 based miami plots.☆18Mar 7, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- An R package for multivariate adaptive shrinkage.☆95Nov 7, 2024Updated last year
- Germline Variant Calling Nextflow Pipeline Based On GATK4 Best Practices☆11Feb 20, 2020Updated 6 years ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆24Dec 10, 2025Updated 4 months ago
- ☆16Jan 10, 2022Updated 4 years ago
- GWAS genetics Fine-mapping method☆26Oct 16, 2024Updated last year
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆35Jun 17, 2025Updated 10 months ago
- Repository for the Anczukow-Lab splicing pipeline☆17Mar 17, 2025Updated last year
- Please consider using/contributing to https://github.com/nf-core/sarek☆18Jan 3, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆16Dec 7, 2020Updated 5 years ago
- Copy Number Methods for Detection and Genome Wide Association Tests☆22Nov 4, 2024Updated last year
- Repository of common bioinformatics scripts☆39Sep 21, 2021Updated 4 years ago
- An statistical approach leveraging segments of distinct ancestries within individuals to estimate similarity in underlying causal effect …☆13Sep 27, 2024Updated last year
- An R package for creating mirrored Manhattan plots☆18Sep 30, 2022Updated 3 years ago
- Ultra-fast, high-performing structural variation (SV) detector☆24Apr 26, 2023Updated 2 years ago
- Fast and scalable variant annotation tool☆30May 1, 2022Updated 3 years ago