Alternatives and similar repositories for RNAseq-workflow:

Users that are interested in RNAseq-workflow are comparing it to the libraries listed below

• hbctraining / DGE_workshop
  ☆389Updated 3 years ago
• crazyhottommy / ChIP-seq-analysis
  ChIP-seq analysis notes from Ming Tang
  ☆790Updated 8 months ago
• thelovelab / DESeq2
  Differential expression of RNA-seq data using the Negative Binomial
  ☆384Updated last month
• jmzeng1314 / NGS-pipeline
  By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline
  ☆324Updated 6 years ago
• hbctraining / Intro-to-ChIPseq
  Intro to ChIPseq using HPC
  ☆302Updated 2 years ago
• ENCODE-DCC / atac-seq-pipeline
  ENCODE ATAC-seq pipeline
  ☆411Updated 9 months ago
• hbctraining / In-depth-NGS-Data-Analysis-Course
  ☆441Updated 4 years ago
• crazyhottommy / RNA-seq-analysis
  RNAseq analysis notes from Ming Tang
  ☆1,001Updated 3 years ago
• hbctraining / scRNA-seq
  ☆555Updated 4 years ago
• hbctraining / Intro-to-DGE
  ☆192Updated 3 weeks ago
• hbctraining / Intro-to-scRNAseq
  ☆580Updated this week
• Teichlab / scg_lib_structs
  Collections of library structure and sequence of popular single cell genomic methods
  ☆458Updated 4 months ago
• xuzhougeng / Learn-Bioinformatics-by-RNA-seq
  ☆180Updated 7 years ago
• broadinstitute / infercnv
  Inferring CNV from Single-Cell RNA-Seq
  ☆605Updated 2 months ago
• crazyhottommy / bioinformatics-one-liners
  Bioinformatics one liners from Ming Tang
  ☆483Updated 4 years ago
• hbctraining / Training-modules
  Materials for short, half-day workshops
  ☆325Updated last week
• snakemake-workflows / rna-seq-star-deseq2
  RNA-seq workflow using STAR and DESeq2
  ☆338Updated 8 months ago
• Ming-Lian / NGS-analysis
  二代测序数据分析
  ☆360Updated last year
• FelixKrueger / TrimGalore
  A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS…
  ☆499Updated last month
• macs3-project / MACS
  MACS -- Model-based Analysis of ChIP-Seq
  ☆730Updated last week
• YuLab-SMU / clusterProfiler
  A universal enrichment tool for interpreting omics data
  ☆1,081Updated this week
• PoisonAlien / maftools
  Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
  ☆460Updated 5 months ago
• ENCODE-DCC / chip-seq-pipeline2
  ENCODE ChIP-seq pipeline
  ☆264Updated last year
• Cloufield / GWASTutorial
  GWAS Tutorial for Beginners
  ☆252Updated 3 months ago
• jmzeng1314 / my_WGCNA
  ☆278Updated 5 years ago
• jmzeng1314 / 5years
  ☆239Updated 5 years ago
• kpatel427 / YouTubeTutorials
  ☆315Updated 6 months ago
• jmzeng1314 / scRNA_smart_seq2
  ☆306Updated 5 years ago
• shenlab-sinai / ngsplot
  Quick mining and visualization of NGS data by integrating genomic databases
  ☆264Updated last year
• deweylab / RSEM
  RSEM: accurate quantification of gene and isoform expression from RNA-Seq data
  ☆438Updated last year