twbattaglia / RNAseq-workflowLinks
A repository for setting up a RNAseq workflow
☆448Updated 8 years ago
Alternatives and similar repositories for RNAseq-workflow
Users that are interested in RNAseq-workflow are comparing it to the libraries listed below
Sorting:
- ☆404Updated 3 years ago
- By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline☆330Updated 7 years ago
- ☆443Updated 5 years ago
- Intro to ChIPseq using HPC☆318Updated 2 years ago
- 二代测序数据分析☆378Updated 2 years ago
- Differential expression of RNA-seq data using the Negative Binomial☆430Updated 3 weeks ago
- ChIP-seq analysis notes from Ming Tang☆836Updated last year
- ENCODE ATAC-seq pipeline☆440Updated last year
- ☆291Updated 6 years ago
- ☆211Updated 4 months ago
- RNAseq analysis notes from Ming Tang☆1,057Updated 4 years ago
- RNA-seq workflow using STAR and DESeq2☆350Updated last week
- Collections of library structure and sequence of popular single cell genomic methods☆487Updated 7 months ago
- GTEx & TOPMed data production and analysis pipelines☆390Updated 3 months ago
- A tool to map bisulfite converted sequence reads and determine cytosine methylation states☆439Updated 4 months ago
- ENCODE ChIP-seq pipeline☆277Updated last year
- ☆187Updated 8 years ago
- ☆250Updated 6 years ago
- Tools for handling Unique Molecular Identifiers in NGS data sets☆535Updated 5 months ago
- GWAS Tutorial for Beginners☆352Updated 2 months ago
- ☆365Updated last year
- A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS…☆536Updated 3 months ago
- HiC-Pro: An optimized and flexible pipeline for Hi-C data processing☆429Updated last year
- Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.☆481Updated 5 months ago
- MACS -- Model-based Analysis of ChIP-Seq☆763Updated last month
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆174Updated 4 years ago
- Tools to process and analyze deep sequencing data.☆750Updated 5 months ago
- A collection of tools for Hi-C data analysis☆627Updated last month
- Application for making ENCODE Blacklists☆332Updated 4 years ago
- Bioinformatics one liners from Ming Tang☆500Updated 5 years ago