Cross-population polygenic prediction
☆101Nov 13, 2025Updated 4 months ago
Alternatives and similar repositories for PRScsx
Users that are interested in PRScsx are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Polygenic prediction via continuous shrinkage priors☆199Nov 21, 2024Updated last year
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Jun 27, 2023Updated 2 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆129Dec 9, 2024Updated last year
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 3 years ago
- Scripts used for generating Neale Lab UKB results☆20Oct 11, 2022Updated 3 years ago
- ☆19Aug 7, 2025Updated 7 months ago
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆73Feb 4, 2021Updated 5 years ago
- A multi-ancestry polygenic risk score approach☆20Jul 20, 2024Updated last year
- LD Score Regression (LDSC)☆770Jan 16, 2026Updated 2 months ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆18Aug 30, 2024Updated last year
- The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation☆159Dec 11, 2025Updated 3 months ago
- Partners Biobank genomics data QC☆30Mar 31, 2020Updated 5 years ago
- Causal Mixture Model for GWAS summary statistics☆96Dec 17, 2025Updated 3 months ago
- R package for the analysis of massive SNP arrays.☆220Aug 21, 2025Updated 7 months ago
- ☆21Sep 1, 2022Updated 3 years ago
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆202Aug 21, 2024Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆64Oct 22, 2025Updated 5 months ago
- regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.☆256Nov 13, 2025Updated 4 months ago
- A rapido and lightweight method for PGS computation☆14Feb 19, 2025Updated last year
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆283Mar 18, 2026Updated last week
- Meta-analysis of genomewide association scans☆62Jul 18, 2024Updated last year
- Program to simulate admixture between multiple populations☆19Mar 8, 2023Updated 3 years ago
- SMR-Portal: an online platform for integrative analysis of GWAS and xQTL data to identify complex trait genes.☆21Dec 2, 2025Updated 3 months ago
- ☆35Dec 19, 2023Updated 2 years ago
- GPA: Genetic analysis incorporating Pleiotropy and Annotation☆16Feb 27, 2020Updated 6 years ago
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆16Mar 17, 2026Updated last week
- Provides helper scripts for inferring local ancestry, performing ancestry-specific PCA, etc☆116Sep 13, 2021Updated 4 years ago
- A collection of commonly used resources for complex trait genetics.☆37Feb 10, 2026Updated last month
- ☆13Jun 15, 2022Updated 3 years ago
- ☆17Aug 25, 2025Updated 6 months ago
- ☆50Jun 24, 2025Updated 9 months ago
- GWAS QC, PCA, haplotype phasing, genotype imputation☆20Aug 13, 2025Updated 7 months ago
- R wrapper for a Java Bayesian GLM variable selection package☆18Feb 7, 2020Updated 6 years ago
- Development for SAIGE and SAIGE-GENE(+)☆90Feb 12, 2026Updated last month
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆202Jul 6, 2023Updated 2 years ago
- Python script for multivariate GWAS meta-analysis☆24Dec 6, 2024Updated last year
- MetaXcan software and manuscript☆189Jul 4, 2025Updated 8 months ago
- ☆196May 2, 2022Updated 3 years ago
- ☆21Aug 20, 2024Updated last year