An R package for creating Q-Q and manhattan plots from GWAS results
☆175Oct 27, 2025Updated last year
Alternatives and similar repositories for qqman
Users that are interested in qqman are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Codebook from my GWAS cookbook☆196May 26, 2022Updated 4 years ago
- Create regional association plots from GWAS or meta-analysis☆64Jan 21, 2020Updated 6 years ago
- Get SNP proxies from the 1000 Genomes Project.☆31Oct 4, 2018Updated 8 years ago
- Meta-analysis of genomewide association scans☆69Jul 18, 2024Updated 2 years ago
- 📊 Circular and Rectangular Manhattan Plot☆648May 8, 2026Updated 5 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Manhattan++☆29Feb 13, 2024Updated 2 years ago
- A comprehensive tutorial about GWAS and PRS☆1,027Apr 1, 2023Updated 3 years ago
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆103May 27, 2025Updated last year
- A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.☆170May 9, 2025Updated last year
- Mitochondrial Solar Plot☆25Feb 25, 2017Updated 9 years ago
- Code to compute the XP-CLR statistic to infer natural selection☆108Jun 13, 2022Updated 4 years ago
- Linking GWAS data to analytical tools in R☆160May 20, 2022Updated 4 years ago
- Rare variant test software for next generation sequencing data☆145Jan 26, 2022Updated 4 years ago
- Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release☆395Jun 7, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A library for running k-mers based GWAS☆131Oct 29, 2024Updated 2 years ago
- annotate a VCF with other VCFs/BEDs/tabixed files☆404Jun 16, 2026Updated 4 months ago
- ☆60May 12, 2021Updated 5 years ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆378Jul 6, 2026Updated 3 months ago
- A tool to plot significant regions of GWAS☆31Jan 27, 2023Updated 3 years ago
- Genome Association Predict Integrate Tools☆247Updated this week
- R package for the analysis of massive SNP arrays.☆227Jul 10, 2026Updated 3 months ago
- Annotation of Genetic Variants☆32Jul 28, 2026Updated 3 months ago
- PLINK is a free, open-source whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a c…☆529Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Causal Mixture Model for GWAS summary statistics☆102Dec 17, 2025Updated 10 months ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆211Jul 16, 2026Updated 3 months ago
- R script that performs gene-set or gene property analysis using TWAS results.☆35Sep 27, 2026Updated last month
- Code used for the GWAS-by-subtraction of non-cognitive skills and follow-up analyses☆22Jan 15, 2021Updated 5 years ago
- Functional genomics and genome-wide association studies☆70Jul 24, 2018Updated 8 years ago
- A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.☆54Dec 27, 2023Updated 2 years ago
- LD Score Regression (LDSC)☆804Jan 16, 2026Updated 9 months ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆217Jul 6, 2023Updated 3 years ago
- LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files☆231Jul 5, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆13Jun 2, 2020Updated 6 years ago
- A Shiny tool to define the cell-type of action by integrating single cell expression data with GWAS☆12Nov 1, 2018Updated 7 years ago
- Mixed Model Package For Genome-wide association mapping.☆18Updated this week
- ☆203Jun 20, 2023Updated 3 years ago
- Examples using R and 1000 genomes data☆29May 18, 2021Updated 5 years ago
- Scripts for running a sibling GWAS☆16Mar 16, 2022Updated 4 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆35Jun 26, 2026Updated 4 months ago