eskederks / eMAGMA-tutorialLinks
A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.
☆72Updated 4 years ago
Alternatives and similar repositories for eMAGMA-tutorial
Users that are interested in eMAGMA-tutorial are comparing it to the libraries listed below
Sorting:
- Analyses conducting GWAS across the UKBB diverse superpopulations☆62Updated 2 months ago
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆76Updated this week
- Visualization of Colocalization Between eQTL and GWAS Data☆87Updated 3 years ago
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆119Updated 3 years ago
- Cross-population polygenic prediction☆97Updated 2 months ago
- High-definition likelihood inference of genetic correlations (HDL)☆125Updated last month
- corrplot of LDSC genetic correlation results☆56Updated 3 years ago
- Repo for the R package coloc☆186Updated last month
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆35Updated 7 months ago
- Partners Biobank genomics data QC☆30Updated 5 years ago
- methods for functional summary-based imputation☆91Updated 3 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆129Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆21Updated 3 years ago
- ☆46Updated 6 months ago
- Linking GWAS data to analytical tools in R☆150Updated 3 years ago
- Meta-analysis of genomewide association scans☆63Updated last year
- Easily download publicly available GWAS summary statistics.☆78Updated 2 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Causal Mixture Model for GWAS summary statistics☆93Updated last month
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆71Updated last month
- Software for estimating correlation of trait effect sizes across populations☆54Updated 7 months ago
- ☆51Updated last month
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆94Updated last week
- ☆78Updated 2 months ago
- R interface to the IEU GWAS database API☆105Updated last month
- Make LocusZoom-like plots with your own LD matrix.☆48Updated 3 years ago
- Find causal cell-types underlying complex trait genetics☆92Updated 10 months ago
- MetaXcan software and manuscript☆185Updated 6 months ago
- ☆88Updated 5 months ago
- Comprehensive tutorial for differential methylation analysis, differential variability analysis and integrative analysis☆29Updated last year