eskederks / eMAGMA-tutorialLinks
A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.
☆69Updated 4 years ago
Alternatives and similar repositories for eMAGMA-tutorial
Users that are interested in eMAGMA-tutorial are comparing it to the libraries listed below
Sorting:
- High-definition likelihood inference of genetic correlations (HDL)☆120Updated last month
- Cross-population polygenic prediction☆86Updated 8 months ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆52Updated 2 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 3 years ago
- Repo for the R package coloc☆169Updated last week
- Visualization of Colocalization Between eQTL and GWAS Data☆84Updated 3 years ago
- methods for functional summary-based imputation☆86Updated 3 years ago
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆115Updated 2 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆32Updated last month
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆67Updated last month
- Meta-analysis of genomewide association scans☆59Updated last year
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆122Updated 7 months ago
- Partners Biobank genomics data QC☆29Updated 5 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- Linking GWAS data to analytical tools in R☆142Updated 3 years ago
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆85Updated 3 weeks ago
- Software for estimating correlation of trait effect sizes across populations☆47Updated 2 months ago
- R interface to the IEU GWAS database API☆97Updated last week
- ☆72Updated 3 weeks ago
- corrplot of LDSC genetic correlation results☆52Updated 3 years ago
- Genotype-based Prediction (GenoPred)☆72Updated this week
- Source code of FUMA GWAS web application☆57Updated last year
- MetaXcan software and manuscript☆170Updated last month
- GWAS Summary Statistics Data Harmonisation☆23Updated last month
- PrediXcan Project☆112Updated 2 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆67Updated 9 months ago
- ☆57Updated 6 months ago
- ☆39Updated last month
- ☆48Updated 2 months ago