choishingwan / PRSice
A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores
☆192Updated 7 months ago
Alternatives and similar repositories for PRSice:
Users that are interested in PRSice are comparing it to the libraries listed below
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆183Updated last year
- ☆193Updated 2 years ago
- Codebook from my GWAS cookbook☆190Updated 2 years ago
- A tool to build a website to browse hundreds or thousands of GWAS.☆169Updated 7 months ago
- Repo for the R package coloc☆164Updated 4 months ago
- MetaXcan software and manuscript☆158Updated this week
- Polygenic prediction via continuous shrinkage priors☆168Updated 4 months ago
- The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation☆127Updated 2 weeks ago
- regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.☆206Updated last month
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆172Updated 3 months ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆104Updated 3 months ago
- PrediXcan Project☆109Updated 2 years ago
- A tutorial on how to run basic polygenic risk score analysis☆75Updated 2 years ago
- ☆97Updated 2 years ago
- Linking GWAS data to analytical tools in R☆134Updated 2 years ago
- R package for the analysis of massive SNP arrays.☆200Updated 3 weeks ago
- High-definition likelihood inference of genetic correlations (HDL)☆108Updated this week
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆192Updated this week
- R-package for structural equation modeling based on GWAS summary data☆223Updated last month
- Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release☆356Updated last year
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆78Updated 3 months ago
- methods for functional summary-based imputation☆79Updated 2 years ago
- R package for quality control of plink genetic datasets☆58Updated 2 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆146Updated 9 months ago
- Cross-population polygenic prediction☆79Updated 4 months ago
- Rare variant test software for next generation sequencing data☆137Updated 3 years ago
- Easily download publicly available GWAS summary statistics.☆75Updated last year
- Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF☆147Updated last month
- GCTA software☆92Updated last week
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆55Updated last year