A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores
☆210Apr 10, 2026Updated 6 months ago
Alternatives and similar repositories for PRSice
Users that are interested in PRSice are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Fine-tuning polygenic risk score models using GWAS summary statistics☆58Oct 5, 2026Updated last week
- ☆104Jul 29, 2026Updated 2 months ago
- Polygenic prediction via continuous shrinkage priors☆217Nov 21, 2024Updated last year
- A tutorial on how to run basic polygenic risk score analysis☆93Jan 24, 2023Updated 3 years ago
- LASSO for GWAS with summary statistics☆80Sep 24, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- LD Score Regression (LDSC)☆801Jan 16, 2026Updated 8 months ago
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆18Aug 30, 2024Updated 2 years ago
- A comprehensive tutorial about GWAS and PRS☆1,023Apr 1, 2023Updated 3 years ago
- Cross-population polygenic prediction☆113Updated this week
- ☆34Oct 18, 2021Updated 4 years ago
- LOGODetect is a powerful tool to identify small segments that harbor local genetic correlation between two traits/diseases.☆29Jul 30, 2025Updated last year
- The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation☆178Jun 3, 2026Updated 4 months ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆216Jul 6, 2023Updated 3 years ago
- A toolkit to calculate polygenic scores using PLINK2, PRS-CS, RapidoPGS, or PRSice2.☆16Aug 16, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- PRS-on-SPARK☆18Feb 4, 2021Updated 5 years ago
- Python script for multivariate GWAS meta-analysis☆25Dec 6, 2024Updated last year
- Software for estimating correlation of trait effect sizes across populations☆61May 30, 2025Updated last year
- High-definition likelihood inference of genetic correlations (HDL)☆143Sep 13, 2026Updated last month
- Meta-analysis of genomewide association scans☆68Jul 18, 2024Updated 2 years ago
- R-package for structural equation modeling based on GWAS summary data☆301Sep 28, 2026Updated 2 weeks ago
- Fuji plot—a circos representation of multiple GWAS results—☆99May 29, 2025Updated last year
- MetaXcan software and manuscript☆203Sep 9, 2026Updated last month
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Regional association plots☆27Apr 1, 2024Updated 2 years ago
- Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release☆395Jun 7, 2023Updated 3 years ago
- R package for the analysis of massive SNP arrays.☆227Jul 10, 2026Updated 3 months ago
- Upgrade to coloc☆14Aug 1, 2018Updated 8 years ago
- Codebook from my GWAS cookbook☆196May 26, 2022Updated 4 years ago
- Adding random effects model to the METAL software☆15Jun 11, 2023Updated 3 years ago
- Causal Mixture Model for GWAS summary statistics☆102Dec 17, 2025Updated 9 months ago
- GWAS Summary Statistics Data Harmonisation☆31Aug 9, 2026Updated 2 months ago
- user-friendly pipeline for GWAS fine-mapping☆14Mar 9, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Pariwise analysis of GWAS☆48Sep 27, 2018Updated 8 years ago
- ☆198May 2, 2022Updated 4 years ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆20Nov 26, 2023Updated 2 years ago
- A tool to build a website to browse hundreds or thousands of GWAS.☆198Apr 22, 2026Updated 5 months ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Mar 27, 2021Updated 5 years ago
- Repo for the R package coloc☆211Updated this week
- Statistical properties of polygenic risk scores☆19Oct 16, 2019Updated 6 years ago