PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
☆157Oct 22, 2025Updated 4 months ago
Alternatives and similar repositories for PHESANT
Users that are interested in PHESANT are comparing it to the libraries listed below
Sorting:
- Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release☆383Jun 7, 2023Updated 2 years ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Dec 25, 2023Updated 2 years ago
- Hypothesis Prioritisation in multi-trait Colocalization☆55Apr 8, 2024Updated last year
- The PheWAS R package☆153Oct 13, 2025Updated 4 months ago
- Regional association plots☆26Apr 1, 2024Updated last year
- ☆13Jul 4, 2023Updated 2 years ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆34Sep 28, 2023Updated 2 years ago
- Connecting GWAS summary data to analytical tools☆23Mar 25, 2024Updated last year
- R package for two-sample Mendelian randomization using the robust adjusted profile score☆40Oct 31, 2025Updated 4 months ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆59Feb 12, 2021Updated 5 years ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆201Jul 6, 2023Updated 2 years ago
- Adding random effects model to the METAL software☆15Jun 11, 2023Updated 2 years ago
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆17Oct 15, 2021Updated 4 years ago
- lhcMR☆26Mar 24, 2024Updated last year
- ☆196May 2, 2022Updated 3 years ago
- Software implementing the Latent Causal Variable Model☆64Jun 30, 2020Updated 5 years ago
- Phenome Exome Association and Correlation Of Key phenotypes☆35Aug 19, 2021Updated 4 years ago
- Power calculations for Mendelian Randomisation☆24Sep 27, 2017Updated 8 years ago
- An R package for phenotype generation and association testing for phenome wide associations studies (PheWAS)☆15Jul 11, 2024Updated last year
- ☆57Jan 16, 2025Updated last year
- LD Score Regression (LDSC)☆763Jan 16, 2026Updated last month
- Genetics ToolboX R package☆32Feb 10, 2020Updated 6 years ago
- SCALLOP-INF analysis☆20Oct 24, 2025Updated 4 months ago
- Causal Mixture Model for GWAS summary statistics☆95Dec 17, 2025Updated 2 months ago
- Reading, querying and writing GWAS summary data in VCF format☆96Nov 21, 2025Updated 3 months ago
- Non-linear Mendelian randomization☆56Jan 4, 2024Updated 2 years ago
- High-definition likelihood inference of genetic correlations (HDL)☆128Dec 15, 2025Updated 2 months ago
- Meta-analysis of genomewide association scans☆63Jul 18, 2024Updated last year
- An R package to manipulate and explore UK Biobank data☆109Feb 22, 2023Updated 3 years ago
- R package for performing 2-sample MR using IEU OpenGWAS database☆532Feb 26, 2026Updated last week
- Source code of FUMA GWAS web application☆59Nov 17, 2023Updated 2 years ago
- Convert GWAS summary statistics to VCF☆48Mar 11, 2023Updated 2 years ago
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆54Nov 28, 2025Updated 3 months ago
- An R package for Mendelian Randomization in Mediation setting☆17Mar 17, 2025Updated 11 months ago
- A Python module for loading phenotypic and genetic data from the UK Biobank.☆39Nov 3, 2025Updated 4 months ago
- Mendelian Randomization Bayesian Model Averaging☆22Feb 21, 2023Updated 3 years ago
- A tool to build a website to browse hundreds or thousands of GWAS.☆192Sep 11, 2025Updated 5 months ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- GENI plots to visualise results from genome-wide association studies☆31Oct 14, 2024Updated last year