MRCIEU / PHESANT
PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
☆140Updated 7 months ago
Alternatives and similar repositories for PHESANT:
Users that are interested in PHESANT are comparing it to the libraries listed below
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆87Updated last year
- An R package to manipulate and explore UK Biobank data☆98Updated last year
- Repo for the R package coloc☆158Updated last month
- ☆56Updated 6 months ago
- R package for CAUSE☆54Updated last year
- Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…☆146Updated 5 months ago
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆72Updated last month
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆32Updated last month
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆46Updated 3 years ago
- R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples☆55Updated last week
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆78Updated last month
- Non-linear Mendelian randomization☆54Updated last year
- Hypothesis Prioritisation in multi-trait Colocalization☆50Updated 9 months ago
- ☆29Updated 3 months ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆23Updated last year
- Data objects for various sets of instruments☆44Updated 4 years ago
- High-definition likelihood inference of genetic correlations (HDL)☆101Updated this week
- The PheWAS R package☆133Updated last month
- Polygenic prediction via continuous shrinkage priors☆161Updated last month
- Pair-wise conditional analysis and colocalisation☆38Updated 8 months ago
- LASSO for GWAS with summary statistics☆72Updated 4 years ago
- Causal Mixture Model for GWAS summary statistics☆68Updated last year
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 3 years ago
- ☆34Updated 3 years ago
- R-package for structural equation modeling based on GWAS summary data☆215Updated 3 weeks ago
- An R package for fitting and visualising radial inverse variance weighted and radial MR-Egger models.☆34Updated 2 months ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆18Updated 2 years ago
- Bayesian multi-response Mendelian randomisation☆16Updated last year
- An R package for Mendelian Randomization☆37Updated 9 months ago
- corrplot of LDSC genetic correlation results☆48Updated 2 years ago