Rapid standardisation and quality control of GWAS or QTL summary statistics
☆95Apr 16, 2026Updated last month
Alternatives and similar repositories for MungeSumstats
Users that are interested in MungeSumstats are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆84Nov 9, 2025Updated 7 months ago
- R interface to the IEU GWAS database API☆109Updated this week
- Harmonise GWAS summary statistics against a reference VCF☆40Jun 15, 2021Updated 4 years ago
- GWAS Summary Statistics Data Harmonisation☆29Jun 5, 2026Updated last week
- Reading, querying and writing GWAS summary data in VCF format☆107Mar 16, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Repo for the R package coloc☆199Dec 4, 2025Updated 6 months ago
- Regional association plots☆27Apr 1, 2024Updated 2 years ago
- cfdr.pleio is an R package implementing conditional and conjunctional false discovery rates for studying pleiotropic gene variants betwee…☆18Feb 9, 2023Updated 3 years ago
- Find causal cell-types underlying complex trait genetics☆96Feb 8, 2026Updated 4 months ago
- Create LocusZoom-style plots in R.☆22Mar 5, 2023Updated 3 years ago
- Meta-analysis of genomewide association scans☆66Jul 18, 2024Updated last year
- Pair-wise conditional analysis and colocalisation☆41May 2, 2024Updated 2 years ago
- A collection of various utilities for GWAS summary statistics☆34May 14, 2024Updated 2 years ago
- LD Score Regression (LDSC)☆787Jan 16, 2026Updated 4 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Linking GWAS data to analytical tools in R☆158May 20, 2022Updated 4 years ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆210Jul 6, 2023Updated 2 years ago
- R-package for structural equation modeling based on GWAS summary data☆280Jun 2, 2026Updated last week
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆294Updated this week
- Software to infer latent pleiotropic components from GWAS summary data☆17Jan 30, 2025Updated last year
- Easily download publicly available GWAS summary statistics.☆79Dec 3, 2023Updated 2 years ago
- DEPICT code, instructions and an example☆57Dec 10, 2025Updated 6 months ago
- ☆39Jan 20, 2021Updated 5 years ago
- A software package for performing and visualising radial multivariable Mendelian randomization analyses☆13May 14, 2026Updated 3 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A tool to build a website to browse hundreds or thousands of GWAS.☆198Apr 22, 2026Updated last month
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆41Feb 8, 2025Updated last year
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆102May 27, 2025Updated last year
- R package for working in the UK Biobank Research Analysis Platform (RAP)☆90Mar 13, 2026Updated 3 months ago
- Non-linear Mendelian randomization☆56Jan 4, 2024Updated 2 years ago
- lhcMR☆26Mar 24, 2024Updated 2 years ago
- ☆23Apr 19, 2026Updated last month
- harmonization, liftover, and imputation of summary statistics from GWAS☆39Aug 28, 2020Updated 5 years ago
- Pleiotropy-informed conditional and conjunctional false discovery rate☆38Jun 3, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- methods for functional summary-based imputation☆104Mar 17, 2026Updated 2 months ago
- Connecting GWAS summary data to analytical tools☆24Mar 25, 2024Updated 2 years ago
- GWAS summary statistics files QC tool☆42Dec 24, 2024Updated last year
- Hypothesis Prioritisation in multi-trait Colocalization☆57Apr 8, 2024Updated 2 years ago
- 📊 Circular and Rectangular Manhattan Plot☆640May 8, 2026Updated last month
- Configs and descriptions of circos plots created on FUMA web application☆15Dec 10, 2017Updated 8 years ago
- High-definition likelihood inference of genetic correlations (HDL)☆138May 8, 2026Updated last month