choishingwan / PRS-TutorialLinks
A tutorial on how to run basic polygenic risk score analysis
☆82Updated 2 years ago
Alternatives and similar repositories for PRS-Tutorial
Users that are interested in PRS-Tutorial are comparing it to the libraries listed below
Sorting:
- Cross-population polygenic prediction☆90Updated last week
- PrediXcan Project☆114Updated 3 years ago
- ☆101Updated 3 years ago
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆72Updated 4 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆59Updated 3 weeks ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆125Updated 11 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Main ricopili repo for public releases☆50Updated 7 months ago
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆200Updated last year
- The Polygenic Score Catalog Calculator is a nextflow pipeline for polygenic score calculation☆152Updated 3 months ago
- methods for functional summary-based imputation☆90Updated 3 years ago
- Sequence kernel association test (SKAT)☆52Updated 3 months ago
- MetaXcan software and manuscript☆177Updated 4 months ago
- A tool to build a website to browse hundreds or thousands of GWAS.☆188Updated 2 months ago
- R package for quality control of plink genetic datasets☆59Updated this week
- Fine-tuning polygenic risk score models using GWAS summary statistics☆54Updated last month
- Development for SAIGE and SAIGE-GENE(+)☆83Updated last week
- Source code of FUMA GWAS web application☆60Updated 2 years ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆69Updated last year
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆67Updated 7 months ago
- Read PLINK BED/BIM/FAM files into R☆41Updated 4 years ago
- Software for estimating correlation of trait effect sizes across populations☆50Updated 5 months ago
- Convert GWAS summary statistics to VCF☆48Updated 2 years ago
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆99Updated 5 months ago
- ☆195Updated 3 years ago
- Genotype-based Prediction (GenoPred)☆75Updated 2 weeks ago
- Documentation on new GWAS Summary Statistics Standard☆23Updated last year
- LDlinkR☆62Updated last year
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆72Updated 5 months ago