A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data
☆30Aug 2, 2022Updated 3 years ago
Alternatives and similar repositories for post-GWAS-pipeline
Users that are interested in post-GWAS-pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆20Oct 4, 2023Updated 2 years ago
- UTMOST (unified test for molecular signatures) is a method for cross-tissue gene expression imputation for transcriptome-wide association…☆46Oct 23, 2025Updated 9 months ago
- Make interactive LocusZoom plots from a local GWAS file☆10May 9, 2025Updated last year
- SCALLOP-INF analysis☆20Jul 7, 2026Updated 3 weeks ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Mar 22, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆74Feb 4, 2021Updated 5 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Updated this week
- user-friendly pipeline for GWAS fine-mapping☆14Mar 9, 2025Updated last year
- R script to make Manhattan-style plot for TWAS☆43Aug 15, 2021Updated 4 years ago
- Fast manhattenplots using ggplot2☆14Apr 24, 2026Updated 3 months ago
- Create LocusZoom-style plots in R.☆22Mar 5, 2023Updated 3 years ago
- ☆24Aug 6, 2021Updated 4 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Aug 19, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆18Mar 18, 2025Updated last year
- R package 📦 for handy functions when working with GWAS (summary) data☆17Jul 29, 2019Updated 6 years ago
- A software package for performing and visualising radial multivariable Mendelian randomization analyses☆13Jul 8, 2026Updated 3 weeks ago
- PredictDB Pipeline for GTEx v7 data☆18Nov 9, 2022Updated 3 years ago
- ☆11Jan 30, 2025Updated last year
- ☆21Nov 15, 2024Updated last year
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Jan 21, 2026Updated 6 months ago
- We design a method for heritability estimation, namely LD Eigenvalue Regression (LDER), which extends the LDSC method and provides more a…☆13Aug 20, 2025Updated 11 months ago
- A collection of various utilities for GWAS summary statistics☆35May 14, 2024Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆13Sep 3, 2024Updated last year
- Regional association plots☆27Apr 1, 2024Updated 2 years ago
- ☆56Jan 16, 2025Updated last year
- Convert GWAS summary statistics to VCF☆49Apr 13, 2026Updated 3 months ago
- Multi-Trait Genome-Wide Association Analysis☆21Dec 19, 2023Updated 2 years ago
- Fine-mapping with infinitesimal effects☆20May 5, 2026Updated 2 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- A tool to plot significant regions of GWAS☆30Jan 27, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- GENI plots to visualise results from genome-wide association studies☆32Oct 14, 2024Updated last year
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆15Feb 9, 2026Updated 5 months ago
- An R package for creating ggplot2 based miami plots.☆20Mar 7, 2025Updated last year
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 3 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆15Jul 2, 2025Updated last year
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 4 years ago
- ☆22Apr 28, 2022Updated 4 years ago