MRCIEU / TwoSampleMR

Related projects ⓘ

Alternatives and complementary repositories for TwoSampleMR

• HaobinZhou / Get_MR
  A package for running MR In batches and in parallel quickly
  ☆284Updated last month
• bulik / ldsc
  LD Score Regression (LDSC)
  ☆653Updated 3 months ago
• linjf15 / MR_tricks
  ☆191Updated 10 months ago
• Nealelab / UK_Biobank_GWAS
  Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release
  ☆349Updated last year
• chr1swallace / coloc
  Repo for the R package coloc
  ☆150Updated this week
• JonJala / mtag
  Python command line tool for Multi-Trait Analysis of GWAS (MTAG)
  ☆171Updated last year
• GenomicSEM / GenomicSEM
  R-package for structural equation modeling based on GWAS summary data
  ☆206Updated 3 weeks ago
• YinLiLin / CMplot
  📊 Circular and Rectangular Manhattan Plot
  ☆531Updated 6 months ago
• weizhouUMICH / SAIGE
  ☆191Updated 2 years ago
• MRCIEU / gwasglue
  Linking GWAS data to analytical tools in R
  ☆117Updated 2 years ago
• choishingwan / PRSice
  A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores
  ☆185Updated 3 months ago
• YuLab-SMU / clusterProfiler
  A universal enrichment tool for interpreting omics data
  ☆1,024Updated last week
• rondolab / MR-PRESSO
  Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.
  ☆83Updated last year
• MareesAT / GWA_tutorial
  A comprehensive tutorial about GWAS and PRS
  ☆836Updated last year
• Cloufield / GWASTutorial
  GWAS Tutorial for Beginners
  ☆178Updated 3 weeks ago
• YuLab-SMU / enrichplot
  Visualization of Functional Enrichment Result
  ☆233Updated 2 weeks ago
• JoniColeman / gwas_scripts
  Codebook from my GWAS cookbook
  ☆186Updated 2 years ago
• mvab / mendelian-randomization-breast-cancer
  Analysis workflow for MRC-IEU PhD mini-project on childhood BMI effect on breast cancer
  ☆76Updated 7 months ago
• MRCIEU / PHESANT
  PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
  ☆136Updated 5 months ago
• jmzeng1314 / scRNA_smart_seq2
  ☆299Updated 5 years ago
• zhanghao-njmu / SCP
  An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
  ☆394Updated 6 months ago
• junjunlab / ClusterGVis
  One-step to Cluster and Visualize Gene Expression Matrix
  ☆245Updated this week
• cran / MendelianRandomization
   This is a read-only mirror of the CRAN R package repository. MendelianRandomization — Mendelian Randomization Package
  ☆44Updated 7 months ago
• jmzeng1314 / tcga_example
  ☆277Updated 5 years ago
• n-mounier / MRlap
  R package to perform two-sample Mendelian Randomisation (MR) analyses using (potentially) overlapping samples
  ☆52Updated last year
• boxiangliu / locuscomparer
  LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.
  ☆105Updated last year
• jmzeng1314 / methy_array
  ☆95Updated 4 years ago
• jmzeng1314 / R_bilibili
  ☆162Updated 5 years ago
• Al-Murphy / MungeSumstats
  Rapid standardisation and quality control of GWAS or QTL summary statistics
  ☆75Updated 3 weeks ago
• jmzeng1314 / GEO
  ☆788Updated 2 years ago