MatteoLacki / opentims_bruker_bridge

Related projects: ⓘ

• MatteoLacki / timspy
  ☆16Updated 3 years ago
• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆16Updated this week
• grosenberger / easypqp
  EasyPQP: Simple library generation for OpenSWATH
  ☆10Updated last month
• mafreitas / tdf2mzml
  ☆25Updated 11 months ago
• michalsta / opentims
  Open-source C++ and Python module for opening binary timsTOF data files.
  ☆43Updated 2 weeks ago
• statisticalbiotechnology / GPTime
  Chromatographic Retention Time prediction with Gaussian Procsses
  ☆9Updated 5 years ago
• gtluu / timsconvert
  ☆29Updated this week
• pFindStudio / pDeep3
  MS/MS prediction for peptides
  ☆22Updated 3 years ago
• MRMkit / MRMkit
  ☆8Updated last week
• MarcIsak / MSLibrarian
  MSLibrarian is an R-package to optimize predicted spectral libraries for DIA proteomics
  ☆14Updated 2 years ago
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆41Updated 11 months ago
• ZhuMSLab / DecoMetDIA
  ☆9Updated 2 years ago
• HuanLab / ISFrag
  A bioinformatic tool facilitating automated in-source fragmentation identification
  ☆10Updated 2 years ago
• smith-chem-wisc / FlashLFQ
  Ultra-fast label-free quantification algorithm for mass-spectrometry proteomics
  ☆19Updated 2 months ago
• wilhelm-lab / oktoberfest
  Rescoring and spectral library generation pipeline for proteomics.
  ☆32Updated last week
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆9Updated 3 years ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆41Updated 2 weeks ago
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆25Updated last year
• mobiusklein / ms_deisotope
  A library for deisotoping and charge state deconvolution of complex mass spectra
  ☆33Updated 2 weeks ago
• statisticalbiotechnology / triqler
  The triqler (TRansparent Identification-Quantification-linked Error Rates)'s source and example code
  ☆19Updated 2 months ago
• kusterlab / universal_spectrum_explorer
  ☆14Updated 2 years ago
• MannLabs / alphadia
  modular & open DIA search
  ☆41Updated this week
• EuBIC / EuBIC2023
  EuBIC 2023 developer's meeting
  ☆13Updated last year
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆19Updated 3 months ago
• pyQms / pyqms
  pyQms, generalized, fast and accurate mass spectrometry data quantification
  ☆28Updated 2 months ago
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆24Updated last week
• zhengfj1994 / MetEx
  MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.
  ☆14Updated 10 months ago
• compomics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆37Updated this week
• mobiusklein / psims
  A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML
  ☆19Updated 3 weeks ago
• nathaniel-mahieu / mz.unity
  mz.unity is an R package for detecting and exploring complex relationships in accurate-mass mass spectrometry data
  ☆13Updated 8 years ago