PayneLab / ProteomicsEducation
☆29Updated 7 months ago
Alternatives and similar repositories for ProteomicsEducation:
Users that are interested in ProteomicsEducation are comparing it to the libraries listed below
- ☆59Updated 10 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆41Updated last week
- Differential Expression Analysis tool box R lang package for omics data☆44Updated last week
- This project is created by the Hao Lab at the Chemistry Department in George Washington University, Washington, D.C. This project aims to…☆24Updated 4 months ago
- Fast and accurate label-free quantification for small and very large numbers of proteomes☆48Updated this week
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆33Updated 10 months ago
- A Python interface to proteomics data repositories☆34Updated 2 weeks ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆28Updated 3 weeks ago
- Absolute quantification package based on quantms.io☆13Updated last month
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Updated 6 years ago
- Create synthetic DIA LC-MS/MS for proteomics experiments☆13Updated 2 years ago
- The state of the art Deep CNN neural network for de novo sequencing of tandem mass spectra☆35Updated 4 months ago
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆17Updated this week
- An tandem mass spectrometry (MS/MS) sequence database search tool.☆47Updated this week
- MS/MS prediction for peptides☆22Updated 4 years ago
- Python package for investigating the structural context of PTMs☆28Updated 2 months ago
- ☆26Updated 2 months ago
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆34Updated 3 weeks ago
- Fast and flexible semi-supervised learning for peptide detection in Python☆43Updated 3 weeks ago
- The repo for LFQ-Analyst☆29Updated 7 months ago
- Using MASST or fastMASST, adding metadata onto a tree ontology for microbes☆18Updated this week
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆78Updated 11 months ago
- Quantitative proteomics workflow☆15Updated 2 years ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆27Updated last year
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆19Updated last month
- TimsR: Easy access to timsTOF Pro data from R.☆9Updated 3 years ago
- MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.☆42Updated last week
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆36Updated last month
- Rescoring and spectral library generation pipeline for proteomics.☆39Updated 2 weeks ago
- Report processing and protein quantification for MS-based proteomics☆40Updated last year