PayneLab / ProteomicsEducationLinks
☆33Updated this week
Alternatives and similar repositories for ProteomicsEducation
Users that are interested in ProteomicsEducation are comparing it to the libraries listed below
Sorting:
- ☆62Updated last year
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆51Updated last month
- Differential Expression Analysis tool box R lang package for omics data☆44Updated last week
- Absolute quantification package based on quantms.io☆14Updated 2 months ago
- Using MASST or fastMASST, adding metadata onto a tree ontology for microbes☆20Updated 3 months ago
- Comprehensive Python client for the Uniprot REST API☆50Updated last month
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆27Updated 6 months ago
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆35Updated last year
- PRedictor of IMmunogenic Epitopes☆23Updated 2 months ago
- A library for QC report based on MultiQC framework☆15Updated this week
- R package for functionally scoring phosphorylation sites☆20Updated 5 years ago
- HLA-II ligand predictor.☆44Updated 2 years ago
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆46Updated last year
- FBMN-STATS: A hitchhiker's guide to statistical analysis of Feature-based Molecular Networks☆38Updated 3 weeks ago
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆31Updated 2 years ago
- MSBooster allows users to add deep learning-based features to .pin files before Percolator PSM rescoring☆19Updated this week
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆22Updated last month
- A Python interface to proteomics data repositories☆34Updated 3 weeks ago
- An R package to estimate relative protein abundances from ion quantification in DIA-MS-based proteomics☆31Updated 4 months ago
- Quantitative proteomics workflow☆15Updated 2 years ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆68Updated last week
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆28Updated 2 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆25Updated last year
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆40Updated 2 weeks ago
- MS/MS prediction for peptides☆23Updated 4 years ago
- Shiny app to easily create publishable plots for scientific papers☆34Updated 4 months ago
- MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence …☆79Updated last year
- Infrastructure of AlphaX ecosystem☆39Updated 2 weeks ago
- Documentation is available here:☆17Updated 3 weeks ago