KULL-Centre / AF2chiLinks
☆19Updated 2 weeks ago
Alternatives and similar repositories for AF2chi
Users that are interested in AF2chi are comparing it to the libraries listed below
Sorting:
- Convert coarse-grained protein structure to all-atom model☆48Updated 7 months ago
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆60Updated this week
- Predicting mutational effects on protein binding from folding energy. ICML 2025.☆40Updated 5 months ago
- Modelling protein conformational landscape with Alphafold☆54Updated 5 months ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆48Updated 2 months ago
- ☆46Updated 2 months ago
- ☆65Updated 3 months ago
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing GNN☆27Updated 2 weeks ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆61Updated 8 months ago
- Benchmarking code accompanying the release of `bioemu`☆53Updated 2 months ago
- ☆54Updated 2 months ago
- ☆25Updated 8 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆64Updated last month
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)☆44Updated this week
- ☆37Updated 2 years ago
- Software for the prediction of DEER and PRE data from conformational ensembles.☆12Updated 8 months ago
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodiverge…☆12Updated last week
- ☆19Updated 9 months ago
- protein structure generation with sparse all-atom denoising models☆57Updated last month
- Structure prediction and design of proteins with noncanonical amino acids☆115Updated last month
- ☆42Updated last year
- Extension of ThermoMPNN for double mutant predictions☆53Updated 3 months ago
- Binding pocket optimization based on force fields and docking scoring functions☆37Updated 10 months ago
- A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.☆32Updated 3 years ago
- A benchmark for 3D biomolecular structure prediction models☆67Updated 8 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆51Updated this week
- Deep generative modeling of protein structural ensembles☆36Updated 4 months ago
- ☆76Updated 7 months ago
- ☆70Updated last year
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆19Updated 3 months ago