aim-uofa / VFNLinks
[ICLR 2024 Spotlight] The official repo for the paper "De novo Protein Design using Geometric Vector Field Networks".
☆30Updated last year
Alternatives and similar repositories for VFN
Users that are interested in VFN are comparing it to the libraries listed below
Sorting:
- [ICLR 2025 Spotlight] Boltzmann-Aligned Inverse Folding Model as a Predictor of Mutational Effects on Protein-Protein Interactions☆43Updated 10 months ago
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆31Updated last year
- The official code for "TaxDiff: Taxonomic-Guided Diffusion Model for Protein Sequence Generation"☆74Updated last year
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆74Updated 11 months ago
- This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.☆101Updated 2 years ago
- Official Implemetation of ConfDiff (ICML'24) - Protein Conformation Generation via Force-Guided SE(3) Diffusion Models☆75Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆124Updated 11 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆65Updated 8 months ago
- Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)☆61Updated last year
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆58Updated last year
- ☆77Updated 11 months ago
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆47Updated 2 years ago
- Official repository of ReactZyme☆39Updated last year
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆101Updated 8 months ago
- Codes for our paper "Full-Atom Peptide Design with Geometric Latent Diffusion" (NeurIPS 2024)☆105Updated 9 months ago
- ☆82Updated 7 months ago
- A standardized protein design benchmark for motif-scaffolding problems☆72Updated last month
- Structure-conditioned masked language modeling for protein sequence design☆70Updated last year
- DiffModeler: a diffusion model based protein complex structure modeling tool.☆59Updated 2 weeks ago
- ☆39Updated 7 months ago
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆37Updated 2 years ago
- Evolutionary Algorithm with Diffusion Models for Protein Design☆30Updated 3 weeks ago
- Code implementation of "Diffusion probabilistic modeling of protein backbones in 3D for the motif-scaffolding problem" https://arxiv.org/…☆73Updated 2 years ago
- Implementation of DiffPack: A Torsional Diffusion Model for Autoregressive Protein Side-Chain Packing☆89Updated 2 years ago
- A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)☆101Updated last year
- ☆65Updated 2 years ago
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Updated 2 years ago
- ☆23Updated last year
- ☆108Updated 2 years ago
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Updated 2 years ago