KrishnaswamyLab / SAUCIELinks
☆100Updated 9 months ago
Alternatives and similar repositories for SAUCIE
Users that are interested in SAUCIE are comparing it to the libraries listed below
Sorting:
- Deep learning for single-cell transcript counts☆89Updated 4 months ago
- ☆100Updated 2 years ago
- ☆48Updated 6 years ago
- Reproducing the experiments of the paper "Deep generative modeling for single-cell transcriptomics"☆57Updated 6 years ago
- Variational autoencoder for single cell RNA-seq datasets☆44Updated 7 years ago
- Deep Embedding for Single-cell Clustering☆87Updated last year
- A collection of scripts and tools for loading, processing, and handling single cell data.☆74Updated 2 years ago
- Quantifying experimental perturbations at single cell resolution☆109Updated 9 months ago
- Semi-supervised adversarial neural networks for classification of single cell transcriptomics data☆75Updated 6 months ago
- An accurate and efficient deep learning method for single-cell RNA-seq data imputation☆89Updated 3 years ago
- Conditional out-of-distribution prediction☆62Updated 11 months ago
- Subpopulation detection in high-dimensional single-cell data☆138Updated 4 years ago
- ☆56Updated 5 years ago
- ☆66Updated last year
- The art of using t-SNE for single-cell transcriptomics☆126Updated 7 months ago
- covolutional neural network based coexpression analysis☆78Updated 5 years ago
- Training and evaluating a variational autoencoder for pan-cancer gene expression data☆170Updated 6 years ago
- ☆45Updated 2 years ago
- Zero-inflated dimensionality reduction algorithm for single-cell data☆110Updated 5 years ago
- Single-cell Hierarchical Poisson Factorization☆70Updated 2 years ago
- spatial transcriptome, single cell☆68Updated 2 years ago
- ☆80Updated 11 months ago
- ☆90Updated 4 years ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆42Updated 2 years ago
- Batch balanced KNN☆165Updated last year
- Single-cell exploratory data analysis for RNA-Seq☆40Updated 4 years ago
- Nonnegative spatial factorization for multivariate count data☆58Updated 2 years ago
- Implementations in both Matlab and R of the SIMLR method. The manuscript of the method is available at: https://www.nature.com/articles/n…☆111Updated 2 months ago
- Wasserstein Generative Adversarial Network for analysing scRNAseq data☆34Updated 4 years ago
- Accurate and robust imputation of scRNA-seq data☆95Updated 5 years ago