scDeepCluster for Single Cell RNA-seq data
☆106Jul 10, 2024Updated last year
Alternatives and similar repositories for scDeepCluster
Users that are interested in scDeepCluster are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- scDCC: Single Cell Deep Constrained Clustering☆44Jul 10, 2024Updated last year
- Deep soft K-means clustering with self-training for single cell RNA sequence data☆30Jul 20, 2020Updated 5 years ago
- Pytorch implementation of scDeepCluster for Single Cell RNA-seq data☆34Jul 10, 2024Updated last year
- single-cell graph attentional clustering☆13Feb 10, 2022Updated 4 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Iterative transfer learning with neural network improves clustering and cell type classification in single-cell RNA-seq analysis☆53Jun 6, 2025Updated 10 months ago
- ☆15Jun 17, 2021Updated 4 years ago
- ☆24Nov 6, 2021Updated 4 years ago
- Deep count autoencoder for denoising scRNA-seq data☆271Mar 21, 2024Updated 2 years ago
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆154Jul 25, 2024Updated last year
- Simultaneous deep generative modeling and clustering of single cell genomic data☆32Nov 14, 2022Updated 3 years ago
- scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder☆15Jun 7, 2021Updated 4 years ago
- ☆19Dec 1, 2021Updated 4 years ago
- Deep learning for single-cell transcript counts☆89Mar 14, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Deep Embedding for Single-cell Clustering☆89Apr 9, 2024Updated 2 years ago
- ☆101Oct 1, 2024Updated last year
- single-cell graph autoencoder☆25Oct 14, 2021Updated 4 years ago
- Python framework for single-cell RNA-seq clustering with special focus on transfer learning.☆18Aug 29, 2019Updated 6 years ago
- Python package for dimension reduction of high-dimensional biological data.☆16May 23, 2018Updated 7 years ago
- UNCURL is a tool for single cell RNA-seq data analysis.☆15Jun 27, 2022Updated 3 years ago
- An actionable database of publicly available single-cell RNA-seq data☆41Apr 13, 2019Updated 7 years ago
- Discovering novel cell types across heterogenous single-cell experiments☆123Dec 8, 2022Updated 3 years ago
- Clustering through Imputation and Dimensionality Reduction☆63Sep 21, 2017Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- GrandPrix☆16May 27, 2019Updated 6 years ago
- Reproducing the experiments of the paper "Deep generative modeling for single-cell transcriptomics"☆57Dec 15, 2018Updated 7 years ago
- A tool for the unsupervised clustering of cells from single cell RNA-Seq experiments☆129Jun 28, 2021Updated 4 years ago
- ☆47Jul 24, 2025Updated 9 months ago
- Single Cell Multi-omics deep clustering☆30Jul 1, 2025Updated 10 months ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Apr 19, 2021Updated 5 years ago
- ☆11Jan 7, 2020Updated 6 years ago
- A study to compare methods for clustering of scRNA-seq data☆47Jul 19, 2024Updated last year
- Single-cell RNA-seq clustering and annotation☆13Oct 26, 2020Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- "ZINB-based Graph Embedding Autoencoder for Single-cell RNA-seq Interpretations" in AAAI 2022☆26Feb 5, 2023Updated 3 years ago
- Variational autoencoder for single cell RNA-seq datasets☆44Aug 15, 2017Updated 8 years ago
- An accurate and efficient deep learning method for single-cell RNA-seq data imputation☆89Jan 31, 2022Updated 4 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆18Jun 3, 2021Updated 4 years ago
- A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.☆95Jul 23, 2024Updated last year
- Imputation of single cell RNA-sequencing data with autoencoder☆16Jun 23, 2021Updated 4 years ago