Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attention Networks" to appear in ACM Proceedings. <https://arxiv.org/abs/2002.07128>
☆19May 27, 2020Updated 6 years ago
Alternatives and similar repositories for scGAT
Users that are interested in scGAT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- code for "Self-supervised edge features for improved Graph Neural Network training", <arxivlink>☆24Dec 14, 2020Updated 5 years ago
- ☆19Dec 1, 2021Updated 4 years ago
- Multi-omics biomarker discovery tool exploiting a gene-gene interaction network☆18Apr 9, 2024Updated 2 years ago
- Invariant Information Clustering for Unsupervised Image Classification and Segmentation☆16Jul 19, 2019Updated 7 years ago
- Code from some of the posts I published at https://medium.com/@xoelop☆15Nov 13, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆101Oct 1, 2024Updated last year
- GPU-enabled docker container with Jupyterlab for artificial intelligence☆10Aug 11, 2023Updated 3 years ago
- Gene Set Enrichment Analysis Made Awesome☆12May 11, 2018Updated 8 years ago
- Dataset of 9536 H&E-stained patches for colorectal polyps classification and adenomas grading | ICIP21 https://doi.org/10.1109/ICIP42928.…☆36May 18, 2023Updated 3 years ago
- ☆10Nov 29, 2022Updated 3 years ago
- ☆17Sep 20, 2020Updated 5 years ago
- Learn how to construct graphs given representative examples☆14Jul 6, 2021Updated 5 years ago
- A simple file sharing web service in Vue.js and Flask☆12Feb 2, 2023Updated 3 years ago
- Classification of Single cells by Transfer Learning☆11Oct 11, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆154Jul 25, 2024Updated 2 years ago
- ☆13Mar 20, 2021Updated 5 years ago
- Deep soft K-means clustering with self-training for single cell RNA sequence data☆32Jul 20, 2020Updated 6 years ago
- ☆41Dec 29, 2022Updated 3 years ago
- Deep Learning tools for medical image and biomarker analysis☆19Jan 11, 2023Updated 3 years ago
- deepUnet architecture image segmentation model as part of Kaggle carvana competition. This single model gives 0.9964 score on IoU metrics…☆13Jan 17, 2018Updated 8 years ago
- Machine Learning predictions of cancer cell sensitivity to different drugs using data from CCLE (Cancer Cell Line Encyclopedia).☆15Feb 6, 2017Updated 9 years ago
- R package for integrating and comparing multiple single cell genomic datasets☆12Dec 27, 2020Updated 5 years ago
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆16May 4, 2021Updated 5 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Python implementation of this paper, http://research.microsoft.com/en-us/um/people/jiansun/papers/dehaze_cvpr2009.pdf. Done for a Compute…☆13Jul 1, 2015Updated 11 years ago
- weighted indexes for clustering evaluation☆15Apr 18, 2020Updated 6 years ago
- Final Project- Microscopy Cell Segmentation, Deep Learning and Applications Course, EE Dep., Ben-Gurion University☆13Jul 10, 2018Updated 8 years ago
- ☆10Jun 29, 2021Updated 5 years ago
- scSurvival is a new tool for survival analysis from single cell cohort dataset.☆27Apr 27, 2026Updated 4 months ago
- Public repository associated with: Convolutional Neural Network and Rule-Based Algorithms for Classifying 12-lead ECGs☆29Jan 8, 2024Updated 2 years ago
- DNA Microarray Gene Expression Data Classification Using SVM and MLP with Feature Selection Methods Relief and LASSO☆29Jun 25, 2019Updated 7 years ago
- SAFE (Single-cell Aggregated clustering From Ensemble): Cluster ensemble for single-cell RNA-seq data☆19Mar 27, 2021Updated 5 years ago
- An R package for testing high-dimensional covariance matrices☆11Oct 5, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Script for generating the Many Body Distribution Functionals and Density of Functionals representations☆14Jan 28, 2025Updated last year
- Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data☆18Apr 15, 2025Updated last year
- ☆11Oct 29, 2017Updated 8 years ago
- JAX implementation of Graph Attention Networks☆13Jan 29, 2022Updated 4 years ago
- Code and Word2Vec embeddings of LOINC codes for KDD 2019 DSHealth paper "Evaluation of Embeddings of Laboratory Test Codes for Patients a…☆11Jun 13, 2024Updated 2 years ago
- [CVPR 2023] Code for the paper "Masked Images Are Counterfactual Samples for Robust Fine-tuning"☆14Mar 24, 2023Updated 3 years ago
- Code for the AAAI 2012 Manifold Warping paper: http://people.cs.umass.edu/~ccarey/pubs/ManifoldWarping.pdf☆20Mar 9, 2018Updated 8 years ago