ushaham / BatchEffectRemovalLinks
☆57Updated 5 years ago
Alternatives and similar repositories for BatchEffectRemoval
Users that are interested in BatchEffectRemoval are comparing it to the libraries listed below
Sorting:
- Wasserstein Generative Adversarial Network for analysing scRNAseq data☆34Updated 5 years ago
- ☆48Updated 6 years ago
- Accurate and robust imputation of scRNA-seq data☆97Updated 6 years ago
- Implementations in both Matlab and R of the SIMLR method. The manuscript of the method is available at: https://www.nature.com/articles/n…☆113Updated 2 months ago
- K-nearest neighbor smoothing for high-throughput single-cell RNA-Seq data☆59Updated 3 years ago
- ☆29Updated 2 years ago
- scRNAseq integration with triplet neural networks☆41Updated 3 years ago
- ☆16Updated 8 years ago
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆65Updated 5 years ago
- Variational autoencoder for single cell RNA-seq datasets☆44Updated 8 years ago
- ☆101Updated 2 years ago
- Generate cellular maps of differentiation manifolds with complex topologies.☆27Updated 7 years ago
- ☆19Updated 4 years ago
- easy access to benchmark datasets☆50Updated 7 years ago
- ☆51Updated 2 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆30Updated 3 years ago
- A deep learning package for predicting TF binding☆42Updated 5 years ago
- Single-cell Hierarchical Poisson Factorization☆73Updated 3 years ago
- This contains the dataset for comparing scRNA-seq analysis methods☆92Updated 5 years ago
- Clustering through Imputation and Dimensionality Reduction☆63Updated 8 years ago
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆54Updated last year
- R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.☆66Updated 7 years ago
- Zero-inflated dimensionality reduction algorithm for single-cell data☆110Updated 5 years ago
- Deep Embedding for Single-cell Clustering☆89Updated last year
- An accurate and efficient deep learning method for single-cell RNA-seq data imputation☆89Updated 3 years ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆41Updated 3 years ago
- Single-cell RNA-seq Gene Expression Recovery☆112Updated last year
- A study to compare methods for clustering of scRNA-seq data☆43Updated last year
- ☆27Updated 6 years ago
- Biclustering algorithm☆57Updated 8 years ago