ushaham / BatchEffectRemovalLinks
☆55Updated 5 years ago
Alternatives and similar repositories for BatchEffectRemoval
Users that are interested in BatchEffectRemoval are comparing it to the libraries listed below
Sorting:
- ☆48Updated 6 years ago
- R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.☆66Updated 7 years ago
- easy access to benchmark datasets☆50Updated 6 years ago
- Accurate and robust imputation of scRNA-seq data☆94Updated 5 years ago
- ☆29Updated 2 years ago
- Variational autoencoder for single cell RNA-seq datasets☆44Updated 7 years ago
- A study to compare methods for clustering of scRNA-seq data☆43Updated 11 months ago
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 6 years ago
- Big data Regression for predicting DNase I hypersensitivity☆30Updated 9 months ago
- R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data☆45Updated 8 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 5 years ago
- ☆16Updated 8 years ago
- Single-cell RNA-seq Gene Expression Recovery☆109Updated 6 months ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆40Updated 3 years ago
- Code for the MNN manuscript figures☆50Updated 6 years ago
- This contains the dataset for comparing scRNA-seq analysis methods☆92Updated 4 years ago
- supporting code for the multinomial single cell RNA-Seq paper☆51Updated 4 years ago
- Fast motif matching in R☆47Updated last year
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- ☆68Updated 7 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- Deep Embedding for Single-cell Clustering☆86Updated last year
- Tutorials and code for ISMB 2019 short course on Recent Advances in Statistical Methods and Computational Algorithms for Single-Cell Omic…☆41Updated 5 years ago
- Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague☆14Updated 4 years ago
- ☆55Updated 7 years ago
- consistent quantification of external RNA-seq data sets☆58Updated last year
- Implementations in both Matlab and R of the SIMLR method. The manuscript of the method is available at: https://www.nature.com/articles/n…☆111Updated 2 months ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- Code for reproducing "Exploring genetic interaction manifolds constructed from rich single-cell phenotypes"☆53Updated 5 years ago
- ☆51Updated last year