locally query the ncbi taxonomy
☆39Dec 8, 2022Updated 3 years ago
Alternatives and similar repositories for taxadb
Users that are interested in taxadb are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Ancestral Sequence Reconstruction in Python☆15May 9, 2019Updated 7 years ago
- genome basic statistics tool (e.g. n50, n10, ng50,...)☆15Mar 5, 2012Updated 14 years ago
- blast, shmlast☆21Oct 5, 2020Updated 5 years ago
- Multiple sequence alignment browser☆12Dec 12, 2022Updated 3 years ago
- Python bindings for the TaxonKit library☆43Aug 3, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Virus metagenomic pipeline for unknown host or in absence of a host genome☆18Sep 19, 2019Updated 7 years ago
- Flexible circular visualization of genome-associated data with BioPerl and SVG.☆46Jun 18, 2019Updated 7 years ago
- Evolution simulator with extinct lineages☆25Apr 3, 2025Updated last year
- AC-DIAMOND is a DNA-protein alignment tool☆17Oct 11, 2023Updated 2 years ago
- C++ tools for NCBI taxonomy tasks☆12Jun 26, 2025Updated last year
- Visualization tool for (meta)genome assembly graphs☆50Updated this week
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- LAMBDA – the Local Aligner for Massive Biological DatA☆85Aug 26, 2024Updated 2 years ago
- Phylogenetic tree library for JavaScript/Node.js☆39Nov 16, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- De novo VIral Genome Annotator☆25Jan 11, 2026Updated 8 months ago
- SWORD - a highly efficient protein database search☆26Jan 15, 2024Updated 2 years ago
- Please switch to https://github.com/OpenGene/defastq