RNA virus analysis toolkit
☆22Aug 25, 2026Updated this week
Alternatives and similar repositories for rolypoly
Users that are interested in rolypoly are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A community effort to create a shared resource for HMM-based RdRp discovery☆17Jul 14, 2026Updated last month
- An community curated awesome list of tools, software, databases and other resources for working/analysing RNA Viruses☆24Aug 15, 2025Updated last year
- A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.☆25Nov 25, 2025Updated 9 months ago
- Python package to plot a phylogenetic tree on an existing matplotlib axis.☆29Jul 21, 2025Updated last year
- Tool to submit viral sequences to Genbank.☆16May 14, 2026Updated 3 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- genotypst: A bioinformatics Typst package for bioinformatics data analysis and visualization☆20Updated this week
- Plugin that provides pairing functions to the Polars library☆14Feb 14, 2025Updated last year
- The viral taxonomic assignment pipeline☆46Apr 16, 2026Updated 4 months ago
- VirBot: a protein-based RNA virus detector for metagenomic data☆35Jul 29, 2024Updated 2 years ago
- A listing of software, tools and databases useful for virome analysis☆91Aug 23, 2026Updated last week
- ☆35Oct 6, 2025Updated 10 months ago
- Phage Annotation using Protein Structures☆171Updated this week
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆59Jul 17, 2026Updated last month
- a command line tool for viral proteomic tree generation, part of the ViPTree project: http://www.genome.jp/viptree☆38May 25, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A wrapper to identify, bin, classify, and predict host-viral relationship for viruses☆92Dec 27, 2024Updated last year
- Scripts, HMMs and search databases for identifying and classifying viral RdRp sequences☆16Aug 6, 2026Updated 3 weeks ago
- Fast, parallel Rust implementation of Prodigal for prokaryotic gene prediction in microbial genomes☆29Jul 26, 2026Updated last month
- ☆14Jun 17, 2026Updated 2 months ago
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆110Jul 7, 2026Updated last month
- Virus Identification☆29May 26, 2025Updated last year
- Code, scripts, some logs and general misc. from to the RNA viruses in MetaTranscriptome discovery project.☆12Jan 5, 2023Updated 3 years ago
- rapid serotyping of Vibrio parahaemolyticus from whole genome sequencing data using serogroup-specific genes☆10Sep 2, 2021Updated 4 years ago
- ☆13Feb 29, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Viroid-like circRNA discovery and analysis suite☆20Nov 11, 2023Updated 2 years ago
- A Python wrapper for the UniProt Mapping RESTful API.☆16Mar 2, 2026Updated 5 months ago
- Locate antiviral defence systems in prokaryotic genomes☆78Oct 22, 2024Updated last year
- Python library for identification and masking of low-complexity regions in nucleotide sequences☆14Aug 10, 2026Updated 2 weeks ago
- In silico serotyping, finetyping and Bexsero antigen sequence typing of Neisseria meningitidis☆16Feb 19, 2026Updated 6 months ago
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆76Aug 13, 2026Updated 2 weeks ago
- geNomad: Identification of mobile genetic elements☆328Mar 29, 2026Updated 5 months ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆22Feb 21, 2025Updated last year
- Prediction of virus-host association using protein language models and multiple instance learning☆23Jun 13, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Unified Human Gut Virome Catalog☆48May 29, 2026Updated 3 months ago
- Identify and remove contaminants from metagenome-assembled genomes☆18Feb 16, 2024Updated 2 years ago
- C++ tools for NCBI taxonomy tasks☆12Jun 26, 2025Updated last year
- Simple Python interface to CoverM's fast coverage estimation functions☆11Dec 20, 2024Updated last year
- Cython bindings and Python interface to HMMER3.☆169Aug 19, 2026Updated last week
- Pipeline for identifying, annotation, and quantifying phage sequences in (meta)-genomic sequences.☆19Jul 28, 2026Updated last month
- ☆18Oct 7, 2024Updated last year