GMOD / vcf-jsLinks
High performance Variant Call Format (VCF) parser in pure JavaScript
☆24Updated 2 months ago
Alternatives and similar repositories for vcf-js
Users that are interested in vcf-js are comparing it to the libraries listed below
Sorting:
- ☆26Updated 2 years ago
- v2.x of the microassembly based somatic variant caller☆24Updated last month
- Unfazed by genomic variant phasing☆27Updated last year
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 2 weeks ago
- BED QC tool (in the making)☆16Updated 3 years ago
- ☆13Updated 8 years ago
- ☆21Updated last month
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Updated 6 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Updated 3 years ago
- Telomerecat: The telomere computational analysis tool☆14Updated 4 years ago
- Bam Read Index - Extract alignments from a bam file by readname☆27Updated last year
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 3 years ago
- Tools to gather evidence for structural variation via breakpoint detection.☆19Updated 4 months ago
- The Genome U-Plot is a JavaScript tool to visualize chromosomal abnormalities in the Human Genome using a U-shape layout.☆32Updated 2 years ago
- An Expectation-Maximization algorithm to infer mutational signatures☆25Updated 8 years ago
- structure detection program☆17Updated 9 months ago
- Pan gGnome Viewer☆10Updated last month
- iAnnotateSV is a Python library and command-line software toolkit to annotate and visualize structural variants detected from Next Genera…☆16Updated last week
- This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm…☆16Updated last year
- Clinical Variant Annotation Pipeline☆10Updated 5 years ago
- Code for RNA-seq gene coexpression analysis☆10Updated 3 years ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago
- ☆22Updated last year
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Updated 6 years ago
- Allele frequency filter app☆14Updated 3 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆29Updated 5 months ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- Reducing reference bias using multiple population reference genomes☆32Updated last year
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Updated 2 years ago