EricArcher / strataG
strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
☆25Updated 2 weeks ago
Alternatives and similar repositories for strataG:
Users that are interested in strataG are comparing it to the libraries listed below
- method for modeling continuous and discrete population genetic structure☆35Updated last year
- Population assignment analysis using R☆17Updated 4 months ago
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- stackr: an R package to run stacks software pipeline☆29Updated 4 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆15Updated 3 years ago
- the hierfstat package☆24Updated 4 months ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆40Updated 6 months ago
- ☆30Updated 2 years ago
- Fast and simple simulation-based population genetic inference in R☆27Updated this week
- RADseq Data Exploration, Manipulation and Visualization using R☆59Updated 4 months ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆28Updated 3 weeks ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆69Updated 10 months ago
- UCE Bioinformatics Pipeline☆15Updated 4 months ago
- Process MS results in R, in a tidy way☆17Updated 6 years ago
- Simple and flexible manipulation of genomic data.☆15Updated 9 months ago
- microhaplotype visualizer and analyzer☆18Updated 3 years ago
- Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putati…☆8Updated 5 years ago
- Vignettes for Population Genetics in R☆25Updated 4 years ago
- Repository for speciation genomics website☆24Updated 8 months ago
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Updated last year
- initial commit☆26Updated 2 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 3 years ago
- Population and Evolutionary Genetics Analysis System☆29Updated 3 weeks ago
- A collection of R code for dealing with SNP data and analyses☆23Updated last year
- An R Package to build and simulate coalescent models☆20Updated 11 months ago
- ☆13Updated 7 years ago
- An R package for reproducible and automated ADMIXTOOLS analyses☆29Updated last month
- ☆26Updated 3 years ago
- Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself☆42Updated last week
- Phylogenetic penalized likelihood☆47Updated 8 months ago