strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
☆26Jan 5, 2026Updated 6 months ago
Alternatives and similar repositories for strataG
Users that are interested in strataG are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Population assignment analysis using R☆16Jul 4, 2025Updated last year
- Tools for data conversion and results visualization for fineRADstructure (http://cichlid.gurdon.cam.ac.uk/fineRADstructure.html)☆10Mar 24, 2020Updated 6 years ago
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 8 years ago
- RADseq Data Exploration, Manipulation and Visualization using R☆61Sep 4, 2025Updated 10 months ago
- Scripts for going from raw .fastq files to processed and quality-checked .bam files for downstream analysis☆14Nov 23, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Sep 12, 2025Updated 10 months ago
- A collection of R code for dealing with SNP data and analyses☆24May 16, 2023Updated 3 years ago
- An open-source data management system for tracking environmental DNA samples and metadata☆15Aug 8, 2024Updated last year
- MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R☆18Sep 5, 2025Updated 10 months ago
- A package for population structure inference from RAD-seq data☆36May 14, 2021Updated 5 years ago
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆18Jul 31, 2025Updated 11 months ago
- RADseq workflow using STACKS☆62Updated this week
- machine learning applications for dadi☆17Jan 23, 2025Updated last year
- Welcome to Physcraper’s repository! Automatic gene tree updating using the Open Tree of Life.☆13May 13, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Simple and flexible manipulation of genomic data.☆16Apr 16, 2025Updated last year
- adegenet: a R package for the multivariate analysis of genetic markers☆201Feb 7, 2025Updated last year
- polysat 1.7: tools for polyploid microsatellite analysis☆12Dec 20, 2024Updated last year
- method for modeling continuous and discrete population genetic structure☆39May 2, 2026Updated 2 months ago
- loco-pipe is an automated Snakemake pipeline that streamlines a set of essential population genomic analyses for low-coverage whole genom…☆32Jan 21, 2026Updated 6 months ago
- Clustering phylogenetic trees with python☆26Aug 14, 2024Updated last year
- Pipeline for GTseq genotyping and quality control☆15Jan 30, 2023Updated 3 years ago
- Naive PCA for genotype data☆10Jul 27, 2016Updated 9 years ago
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆16Jan 20, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- babette is an R package to work with BEAST2☆46Updated this week
- Trim, Align to genome, Deduplicate, Realign WGS sequencing samples☆17Feb 23, 2026Updated 4 months ago
- Bayesian species delimitation integrating genes and traits☆12Aug 17, 2021Updated 4 years ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆19Sep 19, 2020Updated 5 years ago
- A set of functions to visualise genotypes based on a VCF☆90Jan 28, 2022Updated 4 years ago
- Guide to transcriptome assembly & analysis☆21Apr 12, 2017Updated 9 years ago
- mytax is a tool for building custom taxonomies, useful for nucleotide sequence classification☆13Jun 30, 2026Updated 3 weeks ago
- eDNA metabarcoding pipeline☆48Mar 11, 2026Updated 4 months ago
- mPTP - a tool for single-locus species delimitation☆30Mar 14, 2026Updated 4 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Genetic Map Comparison☆20Nov 10, 2022Updated 3 years ago
- A repository for my work on rCRUX☆14Jun 21, 2024Updated 2 years ago
- R package: Evolutionary biology in R☆21Updated this week
- PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs☆53Oct 28, 2025Updated 8 months ago
- TeraStructure is a new algorithm to fit Bayesian models of genetic variation in human populations on tera-sample-sized data sets (10^12 o…☆49Jan 1, 2020Updated 6 years ago
- Estimate population history parameters from site pattern frequencies.☆13Jun 28, 2026Updated 3 weeks ago
- ☆12Mar 11, 2025Updated last year