An open-source data management system for tracking environmental DNA samples and metadata
☆15Aug 8, 2024Updated last year
Alternatives and similar repositories for medna-metadata
Users that are interested in medna-metadata are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- eDNA metabarcoding pipeline☆48Updated this week
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆18Jul 31, 2025Updated 11 months ago
- ☆15Apr 1, 2024Updated 2 years ago
- ☆24Feb 23, 2023Updated 3 years ago
- MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R☆18Sep 5, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Shark genomics & beyond - This is a central portal page for the project Squalomix, directed mainly by Molecular Life History Laboratory a…☆11May 27, 2026Updated last month
- Mitohelper: a mitochondrial reference sequence analysis tool for fish eDNA studies☆21Jul 12, 2026Updated last week
- GPU-accelerated DNA barcode classification☆14Jan 2, 2025Updated last year
- Python-based pipeline for analyzing Nanopore sequencing metabarcoding data☆18Jun 28, 2021Updated 5 years ago
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆26Jan 5, 2026Updated 6 months ago
- AMPtk: Amplicon ToolKit for NGS data (formally UFITS)☆39Nov 18, 2023Updated 2 years ago
- The goal of MaineBallot.org is to provide concise, non-partisan information to make it easy to understand the ballot questions pending in…☆16Updated this week
- JAMP - Just Another Metabarcoding Pipeline☆39Jan 7, 2022Updated 4 years ago
- ☆15May 1, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Make a non-redundant, comprehensive COI database from NCBI and BOLD and include customizing options☆20May 26, 2025Updated last year
- This repository contains Jupyter notebooks developed by the passive acoustic community for the SoundCoop project.☆17Feb 25, 2025Updated last year
- ☆20Jul 2, 2026Updated 3 weeks ago
- R package supporting interactive data access on BOLD☆25Updated this week
- GONE: Scripts, programs and an example data set☆57May 12, 2026Updated 2 months ago
- Scripts for going from raw .fastq files to processed and quality-checked .bam files for downstream analysis☆14Nov 23, 2021Updated 4 years ago
- A python package to query different databases of boldsystems.org☆32Oct 28, 2024Updated last year
- ☆11Jan 8, 2024Updated 2 years ago
- Reproducible Reporting with R (R3) training materials for marine ecosystem indicators☆13Sep 7, 2021Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scripts and files for the annual Short Read Analysis Workshop☆19Jul 17, 2026Updated last week
- PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs☆53Oct 28, 2025Updated 8 months ago
- creating reference databases for amplicon sequencing☆51Jan 13, 2026Updated 6 months ago
- A forked version of thesisdown for writing UNSW theses with bookdown and RMarkdown☆11Jan 12, 2018Updated 8 years ago
- Site frequency spectrum estimation based on window expectation-maximisation algorithm☆17May 19, 2023Updated 3 years ago
- Repository for all the code associated with the paper "Reconciling biodiversity protection, food production, and climate change mitigatio…☆19Oct 10, 2022Updated 3 years ago
- A program for degenerate primer design for broad taxonomic-range PCR for microbial ecology studies☆32Jun 9, 2023Updated 3 years ago
- A web app for environmental DNA metabarcoding analysis☆11Dec 30, 2021Updated 4 years ago
- A statistical framework for reference-free inference of archaic local ancestry☆15Nov 8, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆16Jan 20, 2025Updated last year
- ☆19Jun 22, 2026Updated last month
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Sep 12, 2025Updated 10 months ago
- ☆15Dec 7, 2023Updated 2 years ago
- 2020-tutorial created by GitHub Classroom☆11Oct 28, 2020Updated 5 years ago
- Template repository for standardizing thematic species checklist data to Darwin Core using R☆18Mar 20, 2026Updated 4 months ago
- Physalia course Machine Learning for Multi-Omics Integration☆21Jun 11, 2025Updated last year