Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observed phenotypic mean, phenotypic variance and additive genetic variance.
☆16Jan 20, 2025Updated last year
Alternatives and similar repositories for QGglmm
Users that are interested in QGglmm are comparing it to the libraries listed below
Sorting:
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆18Aug 29, 2017Updated 8 years ago
- ☆14Nov 29, 2025Updated 3 months ago
- Demographic inference from whole genomes☆13Oct 18, 2022Updated 3 years ago
- An R package for creating 3D barplots☆12Jan 8, 2023Updated 3 years ago
- R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)☆10Sep 17, 2020Updated 5 years ago
- R Package for Hierarchical Regularized Regression to Incorporate External Data☆10Dec 17, 2025Updated 2 months ago
- Structured Linear Mixed Model is a method to test for loci that interact with multiple environments.☆14Sep 16, 2020Updated 5 years ago
- materials and website for the 2016 kallisto sleuth workshop☆11Nov 7, 2016Updated 9 years ago
- Zhou & Stephens (2014) GEMMA multivariate linear mixed model☆12Oct 24, 2020Updated 5 years ago
- R package for fast maximum-likelihood estimation of mixture proportions using SQP.☆11Dec 21, 2023Updated 2 years ago
- Kinship In Mixed Model Analysis of RNA-seq☆15Apr 14, 2025Updated 10 months ago
- Software for linkage disequilibrium graphical models☆16Apr 6, 2025Updated 10 months ago
- Code and Tutorials for Running the MArginal ePIstasis Test (MAPIT)☆19Nov 29, 2022Updated 3 years ago
- Multivariate vIsualisatioN and OuTlier Analysis Using R☆14Apr 8, 2023Updated 2 years ago
- method for modeling continuous and discrete population genetic structure☆38Jan 8, 2024Updated 2 years ago
- Kernel k Nearest Neighbors in R☆17Feb 20, 2026Updated last week
- Polygenic Adaptation Likelihood Method - Inferring natural selection on complex traits from whole-genome genealogies☆16Nov 13, 2020Updated 5 years ago
- Multiple membership random effects. Wrapper around lme4::lmer and lme4::glmer.☆22Oct 18, 2023Updated 2 years ago
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Sep 12, 2025Updated 5 months ago
- Python solutions to the code examples in Dobson AJ & Barnett AG: "An Introduction to Generalized Linear Models (3rd ed)☆22Mar 20, 2017Updated 8 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Aug 8, 2023Updated 2 years ago
- Automated and Distributed Population Genetic Model Inference from Allele Frequency Spectra☆18Dec 4, 2025Updated 2 months ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆38Sep 14, 2025Updated 5 months ago
- GridLMM package☆39Oct 16, 2025Updated 4 months ago
- Pairwise Hierarchical Model☆20Mar 11, 2022Updated 3 years ago
- R package for fitting high-dimensional multivariate linear mixed effect models☆37Oct 20, 2025Updated 4 months ago
- Tools for inference of the DFE with dadi☆15Apr 16, 2021Updated 4 years ago
- ☆20Sep 10, 2020Updated 5 years ago
- Provides a formula interface to 'ggplot2' graphics.☆38Jan 17, 2026Updated last month
- An R package for detecting Gene-by-Environment (GxE) interaction effects on the transcriptome using Allele Specific Expression quantified…☆22Oct 27, 2021Updated 4 years ago
- Population assignment analysis using R☆15Jul 4, 2025Updated 7 months ago
- R package to estimate kinship and FST from SNP data☆21Jan 27, 2026Updated last month
- asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models☆20Nov 8, 2025Updated 3 months ago
- defiNETti is a program for performing Bayesian inference on exchangeable (or permutation-invariant) data via deep learning. In particula…☆20Apr 10, 2018Updated 7 years ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆24Aug 20, 2024Updated last year
- BayesVarSel: R package to calculate Bayes factors, model choice and variable selection in linear models☆11Oct 21, 2025Updated 4 months ago
- Website☆16Aug 30, 2025Updated 6 months ago
- R Code for Causal Inference by Hernán and Robins☆22Oct 5, 2021Updated 4 years ago
- Stan website built using Quarto, theming in repo quarto-config☆23Jan 23, 2026Updated last month