Snakemake port of the original Galba pipeline
☆13Oct 11, 2026Updated 2 weeks ago
Alternatives and similar repositories for GALBA2
Users that are interested in GALBA2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The Ribosomal Operon Database (ROD)☆13Apr 2, 2025Updated last year
- Tetemer, an R package and Shiny app for interactively fitting population parameters to k-mer spectra of diploids, triploids, and tetraplo…☆16Jul 30, 2026Updated 2 months ago
- Phylommand is a software package to create, manipulate, and/or analyze phylogenetic trees or pairwise alignments.☆11Sep 5, 2024Updated 2 years ago
- Ultra-efficient and sensitive method to search for Open Reading Frames in spliced genomes guided by reference annotation to maximize prot…☆46Oct 13, 2026Updated last week
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆23Aug 9, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Tiberius is a deep learning gene finder.☆145Updated this week
- TransAnnot - a fast transcriptome annotation pipeline☆20Jan 22, 2025Updated last year
- Domain based annotation of transposable elements☆25Jul 21, 2026Updated 3 months ago
- 🗻 Visualization of genome/gene sequence synteny☆42Dec 13, 2023Updated 2 years ago
- Emending Alignment of Spliced Transcript Reads☆13Jan 19, 2026Updated 9 months ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Mar 29, 2023Updated 3 years ago
- ☆16Apr 25, 2019Updated 7 years ago
- BRAKER re-implemented with snakemake☆92Oct 10, 2026Updated 2 weeks ago
- A tool to construct repeats directly from raw reads☆17May 29, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation☆213Sep 28, 2026Updated 3 weeks ago
- Fast Tandem Repeat Finder☆20Aug 9, 2026Updated 2 months ago
- Programs used in the lab for various tasks☆14Jul 3, 2026Updated 3 months ago
- Decoding the functional networks of non-model organisms☆13Aug 12, 2026Updated 2 months ago
- MView extracts and reformats the results of a sequence database search or multiple alignment.☆32Sep 8, 2024Updated 2 years ago
- 🌟🧬 GraphBin-Tk: assembly graph-based metagenomic binning toolkit☆24Jun 25, 2026Updated 4 months ago
- HAlign 4: A New Strategy for Rapidly Aligning Millions of Sequences☆20Sep 21, 2026Updated last month
- k-mer-based non-Bayesian Taxonomic Classifier☆21May 28, 2026Updated 4 months ago
- Benchmark data structures for kmer sets.☆13Aug 29, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆14Jun 25, 2025Updated last year
- (DRExM³L) Drug REpurposing using eXplainable Machine Learning and Mechanistic Models of signal transduction☆12Jun 5, 2026Updated 4 months ago
- A "dot"-plot style viewer for .1aln files☆11Mar 17, 2026Updated 7 months ago
- ☆16Apr 11, 2026Updated 6 months ago
- A ggplot2 layer for drawing brackets annotated with p-values and significance testing between barplot samples.☆11May 25, 2017Updated 9 years ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆80Feb 11, 2022Updated 4 years ago
- R package that makes linux environment modules available from R☆11Jan 13, 2023Updated 3 years ago
- Taxonomy classification of viral sequences / contigs☆13Jul 15, 2025Updated last year
- Stock Trading Model using Q Learning☆10Dec 16, 2020Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- A genome completeness evaluation tool based on miniprot☆270Oct 7, 2026Updated 2 weeks ago
- ML approach to discerning "best" Open Reading Frames (ORFs) from "noisy" transcriptomic data. Intended for identification of lineage-spec…☆10Aug 20, 2024Updated 2 years ago
- Find, circularise and annotate mitogenome from PacBio assemblies☆204May 11, 2025Updated last year
- stageR package☆13May 8, 2026Updated 5 months ago
- Manipulate and generate figures for trees in Newick format☆22Jul 31, 2025Updated last year
- ☆94Updated this week
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆26Dec 5, 2024Updated last year