Alignment of RNAs
☆27Jul 31, 2024Updated 2 years ago
Alternatives and similar repositories for LocARNA
Users that are interested in LocARNA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RNAlien - unsupervised RNA family model construction☆13Jun 8, 2021Updated 5 years ago
- Efficient target prediction incorporating accessibility of interaction sites☆58Updated this week
- The ViennaRNA Package☆435Feb 24, 2026Updated 6 months ago
- Galaxy RNA workbench☆41Oct 10, 2020Updated 5 years ago
- A pipeline for structural clustering of RNA secondary structures☆15Apr 21, 2021Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- RNA editing quantification in deep transcriptome data☆16Jul 17, 2025Updated last year
- Galaxy Tool wrappers☆125Updated this week
- Dockerfiles to build Galaxy images☆24Aug 22, 2023Updated 3 years ago
- Graph Grammar Library☆28Jul 7, 2017Updated 9 years ago
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆11Oct 7, 2024Updated last year
- New version of JACUSA -> 2.0☆32Jun 2, 2026Updated 3 months ago
- RNA secondary structure/sequence profiles for homology search and alignment☆133Updated this week
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Nov 11, 2022Updated 3 years ago
- ☆19May 5, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆20Oct 18, 2024Updated last year
- A small collection of useful tutorials and links☆15Apr 13, 2024Updated 2 years ago
- Complete analysis pipeline for PAR-CLIP data☆10May 7, 2015Updated 11 years ago
- Convenience functions for VMD-TCL scripting☆14Apr 3, 2026Updated 5 months ago
- R scripts for NGS data visualization☆13Oct 1, 2025Updated 11 months ago
- A Perl/R pipeline for plotting metagenes☆40Mar 21, 2026Updated 6 months ago
- HiGlass track for displaying arcs between disconnected regions☆10Dec 13, 2022Updated 3 years ago
- Repository for "Nearest neighbor search on embeddings rapidly identifies distant protein relations"☆13Apr 2, 2023Updated 3 years ago
- SSR: A Unifed Framework for Prediction in Secondary Structure of RNA. 整合了LinearFold, E2Efold, MXfold2算法，包含数据集，欢迎一键使用。☆10Dec 31, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- From dereplication to genome enrichment: Enhancing genome recovery across metagenomic samples using MAGmax☆37Aug 28, 2026Updated 3 weeks ago
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆185Aug 10, 2026Updated last month
- BOSTIn is a new, user-friendly phylogenetic artifact identification package.☆13Jul 11, 2026Updated 2 months ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆71Jun 16, 2026Updated 3 months ago
- ☆11Aug 2, 2024Updated 2 years ago
- A software research tool for the analysis of structural communication in protein ensembles☆14Mar 24, 2022Updated 4 years ago
- Golang VNC screenshot utility☆13Feb 19, 2018Updated 8 years ago
- Degenerate Codon Design☆13Feb 13, 2020Updated 6 years ago
- R CRAN package `diptest` : Hartigan's diptest for unimodality (including p-values)☆11Aug 19, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆10Dec 12, 2017Updated 8 years ago
- Simulation code for the prediction of RNA structures.☆14Jan 21, 2025Updated last year
- A metagenome assembler for the linked-reads with high-barcode specificity☆10Feb 27, 2026Updated 6 months ago
- A software for gap filling in genome assemblies☆10Aug 12, 2022Updated 4 years ago
- GenMap - Fast and Exact Computation of Genome Mappability☆124Jun 20, 2024Updated 2 years ago
- A nextflow pipeline for performing bacterial RNA-Seq data analysis☆14Updated this week
- DOM Text Based Multiple Sequence Alignment Library☆21Jul 9, 2019Updated 7 years ago