AviranLab / patteRNALinks
Rapid mining of RNA structure motifs from profiling data.
☆13Updated 3 years ago
Alternatives and similar repositories for patteRNA
Users that are interested in patteRNA are comparing it to the libraries listed below
Sorting:
- Tool package to perform in-silico CRISPR analysis and assessment☆27Updated last year
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated last year
- a python package for KEGG pathway enrichment analysis with multiple gene lists.☆36Updated 7 years ago
- Python bindings for the TaxonKit library☆40Updated 3 weeks ago
- The tRNA adaptation index☆18Updated last month
- FASTAptamer: A Bioinformatic Toolkit for High-Throughput Sequence Analysis of Combinatorial Selections☆10Updated 8 months ago
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- A high-fidelity E. coli RNA-seq compendium☆32Updated 4 years ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated last year
- software for the analysis and visualization of deep mutational scanning data☆34Updated 2 years ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆13Updated 5 years ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆21Updated last year
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆59Updated 4 years ago
- Fishers Exact Test for Python (Cython)☆65Updated 2 months ago
- Computational biology utility scripts☆19Updated last month
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆32Updated last year
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆36Updated 9 months ago
- Python interface to amino acid properties and IEDB☆56Updated 8 months ago
- Python package to plot sequence logos☆29Updated last year
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆27Updated this week
- A genome browser in your Jupyter notebook☆31Updated 3 weeks ago
- Bacterial Annotation by Learned Representation of Genes☆55Updated 4 years ago
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆68Updated last year
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- ☆22Updated last year
- Biological Graphic tool in Python☆34Updated 5 years ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆38Updated this week
- Metagenomic search for novel CRISPR-transposons☆12Updated 3 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆40Updated 8 years ago