ababaian / serratus
Ultra-deep search for novel viruses
☆267Updated 2 years ago
Alternatives and similar repositories for serratus:
Users that are interested in serratus are comparing it to the libraries listed below
- Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.☆376Updated last year
- Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on h…☆355Updated last month
- Genome assembly evaluation tool☆421Updated 4 months ago
- NCBI Prokaryotic Genome Annotation Pipeline☆331Updated this week
- An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within micro…☆229Updated 8 months ago
- PhyML -- Phylogenetic estimation using (Maximum) Likelihood☆181Updated last month
- Gene cluster comparison figure generator☆558Updated 4 months ago
- ATLAS - Three commands to start analyzing your metagenome data☆384Updated last week
- [MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads☆272Updated 2 years ago
- De novo genome assembler for long uncorrected reads☆214Updated last year
- Bioinformatics Workbook repository☆183Updated this week
- Eukaryotic Genome Annotation Pipeline☆339Updated 3 weeks ago
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆392Updated 2 months ago
- Fast taxonomic classification of metagenomic sequencing reads using a protein reference database☆278Updated 2 months ago
- AMRFinderPlus - Identify AMR genes and point mutations, and virulence and stress resistance genes in assembled bacterial nucleotide and p…☆298Updated last month
- hybrid assembly pipeline for bacterial genomes☆586Updated 8 months ago
- Viral genomics analysis pipelines☆192Updated 6 months ago
- Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, e…☆239Updated 3 months ago
- DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) …☆235Updated 2 weeks ago
- adapter trimmer for Oxford Nanopore reads☆355Updated 10 months ago
- Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks☆174Updated this week
- Rapid comparison and dereplication of genomes☆280Updated 3 months ago
- Rapid large-scale prokaryote pan genome analysis☆338Updated 2 years ago
- Tools for fast and flexible genome assembly scaffolding and improvement☆499Updated last year
- pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies b…☆276Updated 5 months ago
- A flexible pipeline for complete analysis of bacterial genomes☆449Updated last week
- 🌈 Interactive analysis of metagenomics data☆411Updated 6 months ago
- Fast genome analysis from unassembled short reads☆284Updated 11 months ago
- Nextflow Tower system☆149Updated 2 months ago
- Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/☆493Updated 2 weeks ago