ababaian / serratusLinks
Ultra-deep search for novel viruses
☆270Updated 2 years ago
Alternatives and similar repositories for serratus
Users that are interested in serratus are comparing it to the libraries listed below
Sorting:
- An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within micro…☆241Updated 11 months ago
- Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on h…☆372Updated 2 weeks ago
- Viral genomics analysis pipelines☆195Updated 9 months ago
- 🌈 Interactive analysis of metagenomics data☆421Updated 9 months ago
- Gene cluster comparison figure generator☆582Updated 7 months ago
- Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.☆379Updated last week
- Informed prediction and analysis of bacterial metabolic pathways and genome-scale networks☆181Updated 3 weeks ago
- Fast taxonomic classification of metagenomic sequencing reads using a protein reference database☆282Updated 2 months ago
- antiSMASH☆214Updated last week
- A sequencing simulator☆201Updated last week
- V-pipe is a pipeline designed for analysing NGS data of short viral genomes☆138Updated last month
- breseq is a computational pipeline for finding mutations relative to a reference sequence using high-throughput DNA resequencing data. It…☆162Updated 2 weeks ago
- Rapid comparison and dereplication of genomes☆299Updated 2 weeks ago
- A user-friendly workflow for phylogenomics☆213Updated 2 weeks ago
- a python package for fast random access to sequences from plain and gzipped FASTA/Q files☆283Updated 6 months ago
- 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results☆232Updated last year
- NCBI Prokaryotic Genome Annotation Pipeline☆339Updated 2 weeks ago
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆411Updated 5 months ago
- A flexible pipeline for complete analysis of bacterial genomes☆461Updated last month
- pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies b…☆281Updated 8 months ago
- [MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads☆274Updated 2 years ago
- De novo genome assembler for long uncorrected reads☆223Updated last year
- A tool to circularize genome assemblies☆242Updated last year
- Bioinformatics Workbook repository☆188Updated last month
- Nanopore sequence read simulator☆274Updated 3 months ago
- A single molecule sequence assembler for genomes large and small.☆680Updated last month
- minimal example implementations for bioinformatics workflow managers☆276Updated 3 years ago
- Eukaryotic Genome Annotation Pipeline☆355Updated last month
- Tools for fast and flexible genome assembly scaffolding and improvement☆514Updated last year
- CAMISIM: Simulating metagenomes and microbial communities☆210Updated 10 months ago