DivyaratanPopli / Kinship_InferenceLinks
This is a tool to estimate pairwise relatedness from ancient DNA, taking in account contamination, ROH, ascertainment bias.
☆13Updated last year
Alternatives and similar repositories for Kinship_Inference
Users that are interested in Kinship_Inference are comparing it to the libraries listed below
Sorting:
- ☆13Updated 2 years ago
- Software to call ROHs☆17Updated 3 months ago
- EM-PCA for Ultra-low Coverage Sequencing Data☆18Updated last month
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Updated 11 months ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆39Updated 2 years ago
- ☆21Updated 2 years ago
- ☆22Updated 2 months ago
- A course with Jupyter Notebooks for Computational Population Genetics☆10Updated 3 years ago
- An R interface for the ADMIXTOOLS software☆34Updated 2 months ago
- SEEKIN: SEquence-based Estimation of KINship☆14Updated 8 years ago
- ☆12Updated 2 years ago
- Coprolite host Identification pipeline☆13Updated last month
- A tool for estimating time-dependent migration rates based on cross-/within-population coalescent rates from MSMC☆16Updated 9 months ago
- Analysis of inference methods on standard population models☆25Updated 4 years ago
- an R package for admixture analyses☆17Updated 10 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 6 months ago
- ☆46Updated 10 months ago
- R Package for performing Qst-Fst analyses☆21Updated 8 years ago
- A small R notebook describing how plot common (aDNA) population genetics PCAs using R and the tidyverse.☆13Updated 6 years ago
- ☆31Updated last week
- Method for dating admixture in ancient DNA specimens☆28Updated 4 years ago
- A framework for simulation-based inference in evolutionary biology☆28Updated 2 weeks ago
- SNP genotyping in polyploids☆17Updated 5 years ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆25Updated 5 years ago
- Module for analysing admixture graphs☆29Updated 7 years ago
- This repo contains tutorials and data for the workshop on phylogenetic methods being delivered at the 2019 Evolution conference in Provid…☆14Updated 6 years ago
- Inference of population structure from time-series genotype data☆15Updated 6 years ago
- Suite of tools for pangenomics built using vg☆25Updated 6 months ago
- Demographic inference from whole genomes☆13Updated 3 years ago
- ☆15Updated 5 years ago