COMBINE-lab / maximum-likelihood-relatedness-estimationLinks
☆22Updated 4 years ago
Alternatives and similar repositories for maximum-likelihood-relatedness-estimation
Users that are interested in maximum-likelihood-relatedness-estimation are comparing it to the libraries listed below
Sorting:
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆46Updated 6 years ago
- ☆15Updated 7 years ago
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated last month
- Tool for visualising assemblies.☆17Updated 10 years ago
- Population-scale detection of novel sequence insertions☆27Updated 3 years ago
- ☆44Updated 8 months ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated 2 years ago
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- Identifying repeats in high-throughput sequencing data☆16Updated last year
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 2 months ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI☆50Updated 5 years ago
- Identification of structural variations☆12Updated 3 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- Error correction for Oxford Nanopore data☆47Updated 4 years ago
- adds sample names and read-group (RG) tags to BAM alignments☆51Updated 5 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 4 years ago
- Rapid competitive read demulitplexer. Made with tries.☆23Updated 6 months ago
- Mapping-free variant caller for short-read Illumina data☆20Updated 5 years ago
- A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information☆30Updated 2 years ago
- Module for analysing admixture graphs☆29Updated 7 years ago
- Using kallisto for metagenomic analysis☆49Updated 8 years ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Updated 4 years ago
- Analysis of inference methods on standard population models☆25Updated 4 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 4 months ago
- Developments in next generation sequencing: instruments, read lengths, throughput. See☆27Updated 7 years ago
- Graphite - Graph-based variant adjudication☆28Updated 4 years ago
- Lossless VCF compression☆21Updated 3 years ago
- Fast calculations of linkage-disequilibrium in large-scale human cohorts☆44Updated 6 years ago