COMBINE-lab / maximum-likelihood-relatedness-estimation
☆22Updated 3 years ago
Alternatives and similar repositories for maximum-likelihood-relatedness-estimation:
Users that are interested in maximum-likelihood-relatedness-estimation are comparing it to the libraries listed below
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated last week
- Tool for visualising assemblies.☆17Updated 9 years ago
- Module for analysing admixture graphs☆28Updated 6 years ago
- Assembly by Reduced Complexity (ARC)☆41Updated 8 years ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated 8 months ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆47Updated 6 years ago
- ☆11Updated 5 years ago
- Identification of structural variations☆12Updated 2 years ago
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆21Updated 5 years ago
- Population-wide Deletion Calling☆35Updated 5 months ago
- My experimental tools on top of htslib. NOT OFFICIAL!!!☆54Updated last year
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 3 years ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 6 years ago
- Horizontal Gene Transfer Detection by Mapping Sequencing Reads☆21Updated 7 years ago
- Workflow for processing Illumina sequencing runs for ancient human DNA☆20Updated 4 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Updated 2 years ago
- NaS is a hybrid approach developped to take advantage of data generated using MinION device. We combine Illumina and Oxford Nanopore tech…☆15Updated 7 years ago
- URMAP ultra-fast read mapper☆38Updated 4 years ago
- Fast and accurate tool for estimating genomic distances between genome-skims☆41Updated last year
- fastq quality assessment and filtering tool☆18Updated 2 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆56Updated 3 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆74Updated 8 years ago
- Adapter trimming and virtual library creation for Illumina Nextera Mate Pair libraries.☆54Updated 6 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆34Updated last year
- ☆43Updated last year
- a simple C++ library for parsing and manipulating VCF files, + many command-line utilities☆20Updated 7 years ago
- compare sequences to a shared root reference sequence.☆24Updated 3 years ago
- adds sample names and read-group (RG) tags to BAM alignments☆52Updated 4 years ago