williamslab / ibisLinks
Algorithm for rapid, phase-free detection of long identical by descent segments
☆24Updated last year
Alternatives and similar repositories for ibis
Users that are interested in ibis are comparing it to the libraries listed below
Sorting:
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month
- Tools for merging Tandem Repeat VCF files☆37Updated 7 months ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Repository for pipeline code☆26Updated last year
- ☆31Updated this week
- machine learning applications for dadi☆16Updated 10 months ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆18Updated 8 years ago
- Suite of tools for pangenomics built using vg☆24Updated 4 months ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆29Updated 6 years ago
- Module for analysing admixture graphs☆29Updated 7 years ago
- ☆44Updated 8 months ago
- Haplotype and population structure inference using neural networks.☆27Updated last year
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated last month
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 8 months ago
- Fitting latent factor mixed models☆13Updated 5 years ago
- Evolutionary Transcriptomics with R☆49Updated last month
- A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.☆16Updated 3 years ago
- Demographic inference from whole genomes☆13Updated 3 years ago
- A set of tools for modelling ancestry patterns along the genome.☆23Updated this week
- ☆11Updated 3 years ago
- Sweep Inference Framework (controlling for correlation)☆29Updated last year
- Integrative analysis of structural variations.☆40Updated last year
- Bayesian hierarchical model for complex trait analysis☆46Updated last year
- A smorgasbord of R functions for performing and teaching population genomic analyses☆19Updated 3 months ago
- R package for pedigree inference based on SNP data☆28Updated 4 months ago
- SparsePainter: fast, accurate and fine-scale chromosome painting software based on PBWT and HashMap☆18Updated 3 months ago
- Automated and Distributed Population Genetic Model Inference from Allele Frequency Spectra☆18Updated last week
- Software for ancestry estimation in unrelated individuals☆21Updated last week
- The flare program performs local ancestry inference☆44Updated last month